UFO10559.5prime Sequence
1044 bp (1042 high quality bases) assembled on 2012-01-06
> UFO10559.5prime
CAGTCGACATGAACAGCGATGAGGTGCAACTGATCAAGAAGACCTGGGAA
ATCCCCGTGGCAACACCAACAGATTCTGGAGCGGCGATACTGACGCAGTT
TTTCAACCGCTTTCCGTCCAACTTGGAGAAGTTCCCCTTCCGCGATGTTC
CTTTGGAGGAGCTAAGTGTGAGTTGTACCTTACACATAGGTCTTCAATTA
ACTCAAGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCC
GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCA
TCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGG
GCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACT
CACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAG
GGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATG
TGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAA
CGTTTCAGTTTGCTCATGGAAACGGTGTAACAAGGGTGACACTATCCCAT
ATCACCAGCTCACCGTCTTTCATTGCATACGAAATTCCGGATGAGCATTC
ATCAGCGGGCAAGATGTGAATAAACGCCGGATAAAACTTGTGCTTATTTT
CTTTACGTCTTTAAAAGGCCGTATATCCAGCTGGACGGTCTGGTTATACG
GTACTTGAGCAACTGACTGAAATGCCTCAAATGTTCTTTACGAT
UFO10559.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob1-RE | 1021 | CG9734-RE | 141..343 | 7..209 | 1015 | 100 | Plus |
| glob1-RF | 921 | CG9734-RF | 101..262 | 7..168 | 810 | 100 | Plus |
| glob1-RD | 1143 | CG9734-RD | 323..484 | 7..168 | 810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15897733..15897935 | 209..7 | 1015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:33:45 has no hits.
UFO10559.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:19 Download gff for
UFO10559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob1-RE | 138..351 | 1..217 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:50 Download gff for
UFO10559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob1-RE | 138..351 | 1..217 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:55 Download gff for
UFO10559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob1-RE | 136..349 | 1..217 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:24:55 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:54:50 has no hits.
