UFO10562.5prime Sequence
1081 bp (1041 high quality bases) assembled on 2012-01-06
> UFO10562.5prime
CAGTCGACATGGTCGGTCCATTCATGCAGGGCCTATTCTTGATTGGCATC
ATCTACTGGTATTCCAAGGGGATGATGTCCATGATCAACGACTACTACAG
AAGTGAGTTCCAGCGAAAGTTGCAGACGGAACCAGCAAAGACGAGGGCAG
AGACACCCATCAATGTGGACAACTTTATGGATTATGTTAGGGAGCTGGAC
ACTCCGGACGAGGTGGCTAGAATTCCGGCGGAAGGAACTGAATCTCCGCC
CATGGGAAACACCTATTGCCACATCCTTCGACGATTCTTGGAGATTACCG
GCACTCTACCACCATTCGATGTTTGCCTAGTTACGAGCAACATAAGAGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTG
TCCATATTGGCCACGTTTAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAAACATATTCTCAATAAACCTTTAGGGAAATAGGCAGGT
TTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCGGA
AATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCAT
GGAAACGGTGTACAAGGGTGAACACCTATCCCATATCACCAGCTCACCGT
TCTTTCATTGCCATAACCAAATTCCGATGAGCATTCATCAGGCGGGCAAA
ATGTGGATAAGCGGATTAAACTGTGGCCTAA
UFO10562.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:35:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42508-RB | 1029 | CG42508-RB | 525..863 | 9..347 | 1695 | 100 | Plus |
| CG42508-RA | 949 | CG42508-RA | 521..859 | 9..347 | 1695 | 100 | Plus |
| Xport-RA | 949 | CG4468-RA | 521..859 | 9..347 | 1695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19914486..19914824 | 347..9 | 1695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:35:09 has no hits.
UFO10562.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:26 Download gff for
UFO10562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4468-RA | 510..860 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:28 Download gff for
UFO10562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Xport-RB | 495..845 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:32 Download gff for
UFO10562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Xport-RA | 513..863 | 1..353 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:25:32 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:55:28 has no hits.
