UFO10569.5prime Sequence
1110 bp (1027 high quality bases) assembled on 2012-01-06
> UFO10569.5prime
CAGTCGACATGAAGTTTTACCTGTTGGTGATTGCAGCCCTCTCGTTTTTG
GCCTACATCAGTTGTGGCATGACTCAATCGAAACGCTCCGTTCCACTCGC
TCAATTTGCAGATGGATGCATCCAGTGCAATTCGAAGGACAACGAACGCT
GCGCCACAGATCCATTGAGCCTGCTCAATCGCAACTGTTCCGATGGATCC
TCCAACTGCTATTCCCGCGTCCTGGATGGCTACACAATTCGCGGCTGTGC
CGTCGATCTGGACAACGCCACGCGTAATTCGTGCAACAACGAGCTACTGT
GCCAGCTGTGCACCTACAGCGAGGGATGCAATCGAAACACCTTCCCGTTG
AGCCGCCTCATGTGCCTACAGTGCACAGGGAACTCGACCTCGTCGTCCTG
CGCCACAGAGACCTATGTATCGGCCAAGATCTGCCCGCTGTACAAGTTCG
GCGACAAGTGCTACATTCGCAATAGCAATCGCACCGTGGACGGATCCTTC
CAGCGCGGCTGTCTCACCTCGGCGAATGCCAGGAAGCAGTGCGTCAAGGA
TGGCAACTGTTATACGTGCGAGGGACGCGGCTGCAACTTTCTGCTGGCCA
ATGATACCAACATTCCGCTGGCACGCGACAGCGGTGCCCAGTTGATCATC
TCCATGACGCTGCTGATCAGCGGTCTTGTCGCCGCCTGGAGACTCGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCACA
GAGTCCAGCGAGCTCGATATCAATTACGCCCCGCCCTGCACTCATCGCAG
TACTGTTGTATTCATTAAGCATTCTGCCGACATGGAAGCCATCACCAAAC
GGCATGATGACCTGAATCGCCAGCGGCATCAGCCCCTTGTCGCTTGCGAT
TAATATTTGCCATGGTGGAAACGGGGCGAAGAAATTGGCCTATATGGCCA
CGTTTAAATC
UFO10569.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15347-RB | 968 | CG15347-RB | 75..762 | 8..695 | 3440 | 100 | Plus |
| CG15347-RA | 923 | CG15347-RA | 133..717 | 111..695 | 2925 | 100 | Plus |
| CG15347-RA | 923 | CG15347-RA | 75..133 | 8..66 | 295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8458700..8459170 | 695..225 | 2355 | 100 | Minus |
| X | 23542271 | X | 8459224..8459383 | 225..66 | 800 | 100 | Minus |
| X | 23542271 | X | 8460765..8460824 | 67..8 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:36:05 has no hits.
UFO10569.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:31 Download gff for
UFO10569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15347-RB | 67..762 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:57 Download gff for
UFO10569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15347-RB | 71..766 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:53 Download gff for
UFO10569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15347-RB | 71..766 | 1..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:53 Download gff for
UFO10569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8458696..8459169 | 226..700 | 99 | <- | Minus |
| X | 8459224..8459382 | 67..225 | 100 | <- | Minus |
| X | 8460766..8460828 | 1..66 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:57 Download gff for
UFO10569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8352729..8353202 | 226..700 | 99 | <- | Minus |
| arm_X | 8353257..8353415 | 67..225 | 100 | <- | Minus |
| arm_X | 8354799..8354861 | 1..66 | 95 | | Minus |
