UFO10573.5prime Sequence
1095 bp (1046 high quality bases) assembled on 2012-01-06
> UFO10573.5prime
CAGTCGACATGGCCAACAGCAGCCGAAGTCGGGCCATTTTGAGCGTTAAT
CTCGATGCGGTCATGGCCAACGATCCGCTGAGGGAGCTCTTCGAGGCCTG
CAAAACGGGCGAGATCGCCAAGGTGAAGAAGCTAATAACGCCTCAGACCG
TGAACGCCAGGGATACGGCGGGACGCAAATCCACACCATTGCATTTCGCA
GCGGGTTATGGACGCCGGGAAGTGGTTGAATTCCTGCTGAACAGCGGCGC
CTCCATACAGGCGTGTGACGAGGGTGGGCTGCACCCGCTGCACAACTGTT
GCTCCTTTGGCCACGCCGAGGTAGTTCGATTGTTGCTGAAGGCAGGTGCC
AGTCCAAACACCACCGACAACTGGAACTACACGCCATTGCACGAGGCGGC
CAGCAAGGGCAAGGTGGATGTGTGCCTGGCTCTGTTGCAGCATGGCGCAA
ACCATACGATCCGCAACTCGGAGCAGAAGACACCACTGGAGCTGGCGGAC
GAGGCGACGCGTCCCGTATTGACCGGCGAATATCGAAAGGATGAGCTGCT
TGAAGCCGCACGCTCGGGGGCCGAGGATCGCCTGCTGGCCCTACTCACGC
CACTCAATGTCAACTGTCATGCCAGCGATGGACGACGCTCAACGCCGCTC
CATCTGGCAGCGGGCTACAATCGGATCGGCATCGTGGAAATTCTGCTGGC
CAACGGAGCGGATGTACATGCTAAGGACAAGGGCGGTCTGGTGCCGCTGC
ACAATGCCTGCTCCTACGGACACTTCGATGTGACCAAGCTGCTTATCCAG
GCGGGCGCCAATGTCAACGCCAACGATCTGTGGGCCTTTACGCCGCTCCA
CGAGGCCGCCTCCAAAAGTCGCGTCGAGGTCTGCAGCCTGCTGCTCAGTC
GTGAGCGGATCCCACCCTCCTAAACTGCCACAGCAAGTCGGCCATCGATG
CGGCGCCCACCATGGAGCTGAAAGAGCGGATTGCCTTTGATACAAGTCAC
TGCTGCTGACGCCTGTCGAAAGTGTGATGTGTCCCGTGCCAAGAAGCTGG
TATGGCCCAAAAAATTGTTAACCTCCGTTGCATATCCAATATTAC
UFO10573.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tnks-RB | 5486 | CG4719-RB | 500..1551 | 9..1054 | 5090 | 99.2 | Plus |
| Tnks-RA | 5486 | CG4719-RA | 500..1551 | 9..1054 | 5090 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25657411..25658198 | 990..204 | 3845 | 99.5 | Minus |
| 3R | 32079331 | 3R | 25660590..25660787 | 206..9 | 990 | 100 | Minus |
| 3R | 32079331 | 3R | 25657278..25657324 | 1054..1008 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:36:38 has no hits.
UFO10573.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:34 Download gff for
UFO10573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tankyrase-RA | 488..1562 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:13 Download gff for
UFO10573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tnks-RA | 493..1567 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:06 Download gff for
UFO10573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tnks-RA | 493..1567 | 1..1072 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:06 Download gff for
UFO10573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25657277..25657350 | 987..1054 | 91 | <- | Minus |
| 3R | 25657415..25658197 | 205..986 | 99 | <- | Minus |
| 3R | 25660592..25660792 | 1..204 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:13 Download gff for
UFO10573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21486314..21486514 | 1..204 | 98 | | Minus |
| arm_3R | 21482999..21483072 | 987..1054 | 91 | <- | Minus |
| arm_3R | 21483137..21483919 | 205..986 | 99 | <- | Minus |
