UFO10584.5prime Sequence
878 bp (800 high quality bases) assembled on 2012-01-06
> UFO10584.5prime
CGGATGAGGATGTACAGCAACTGACTCTGGCGGATGTAAATCAGGCGGAG
GAGCAGCAGGAGATGCCGGCTGTTCGCCTGGCCAGACAATTTGGATTCGG
CCGTGAAGGATTCGGCAGAGGACGCGGCGGATTCGGCGGATTTGGCGGAA
GGCGAGGCGGCGGTGGATTCCGGAGACCCGGTTTCGGTGGCGGTGGATTC
GGCGGATTCTACCCACCGCCACCGCCCTTCTTCGGCGGCCCCTTTTACGG
CGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACC
TTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAA
GTTGTCCATATTGCCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGG
GATTGGCTGAGACGAAAACATATTCTCATAAACCCTTTAGGCAATAGGCC
ACGTTTTCACCGTACAGCCACATCTGCGATATATGTGTAGAACTGCCGGA
AATCGTCTGTATTCCTCAAACGATGAAAACGTTCAGTTTGCTCATGGAAA
CGGGTAAAGGTGAACCTATCCAATCCCA
UFO10584.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9759-RB | 1122 | CG9759-RB | 134..384 | 1..251 | 1255 | 100 | Plus |
| CG9759-RC | 1877 | CG9759-RC | 134..384 | 1..251 | 1255 | 100 | Plus |
| CG9759-RA | 494 | CG9759-RA | 134..384 | 1..251 | 1255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13608863..13609113 | 251..1 | 1255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:36:30 has no hits.
UFO10584.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:33 Download gff for
UFO10584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9759-RA | 134..384 | 1..251 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:09 Download gff for
UFO10584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9759-RA | 134..384 | 1..251 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:02 Download gff for
UFO10584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9759-RA | 134..384 | 1..251 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:02 Download gff for
UFO10584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13608863..13609113 | 1..251 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:09 Download gff for
UFO10584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9434585..9434835 | 1..251 | 100 | | Minus |
