Clone UFO10591 Report

Search the DGRC for UFO10591

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:105
Well:91
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG6738-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10591.5prime Sequence

1104 bp (1076 high quality bases) assembled on 2012-01-06

> UFO10591.5prime
CAGTCGACATGAGTGCCGAAAAATGGGAAAAGAACGAGGAAATTCGAATA
TTCCGGGAGTATTTGCGAATTCCATCTGTACACCCTAATATTGATTATAC
TGCTTGTGTGGAGTTTATTAAGCGGCAGGCAGATTCCCTCAATCTGCCCG
TGGAAGTAGTTTTTCCAGCTGTTAAATCAAAACCTGTGGTGATCATTAAA
TGGGAAGGAAGCCAGCCAAAGTTGCCCTCAATCATTTTAAGCTCGCACAT
GGACGTGGTTCCTGTATTCCCGGAAATGTGGACCCATGAACCCTTCTCCG
CCGACATCGACGAGGAGGGTAGGATCTTTGCACGAGGTGCTCAGGACATG
AAATCGGTGGGCACTCAGTATCTAGGAGCTATACGCCTGCTGAGGGCTGA
TGGCTTTCAGCCGAAAAGGACGCTCTATGTAACCTTTGTTCCTGACGAGG
AGATTGGAGGCATCCATGGCATGGCAGCGTTCGTTGAAACTGACTTTTAC
AAACAAATGAATGTGGGATTCAGCTTGGACGAGGGTGGAACTAGTGCTTC
TGATGTTCATCACTTGTTCTACGCCGAGCGTATACGATGGATTCTCAAAT
TGAAAGTTGCTGGAACCGCCGGTCATGGTTCTCTATTGTTGCCCGATACA
GCCGGAGTTAAGTTGAACTATGTGTTGAACAAGCTGACGGAGTTCCGTGA
ATCGCAAATCCAGCGACTGAAAAACGACAAAAGCCTGAGCATCGGGGATG
TGACCACGGTGAATCTCACCCAGTTGAGTGGCGGAGTGCAGAGCAATGTG
GTTCCACCGCTTTTTGAGGCCATTTTCGACATACGTCTAGCCATAACCCT
GGATTTGGTTGCATTTGAGCGGGAAATTCGAAATTGGTGCGAGGAAGCAG
TGGAGGCATTGACATCGAGTTCCCACTGAAAGAGGCCTATGTGCGGCCAC
CAGGCTGGATGATTCAAACCCCTATTGTTAGCTTTGAAAGTCGCTCTGAT
GACTGGGTCTAAAGTAGCGATAGTGTGTTTTGCAGTCACGAATTGTCGTT
TTATCGCCAGCAAGGAACCCCAGCAATGGTTTCTCACCCATTCATAAGAC
TACA

UFO10591.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG6738-RA 1291 CG6738-RA 42..1140 9..1097 5150 98.5 Plus
CG6733-RA 1291 CG6733-RA 26..1020 3..994 1390 76.6 Plus
CG17109-RB 1373 CG17109-RB 44..949 9..916 835 73.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23099719..23100210 100..591 2460 100 Plus
3R 32079331 3R 23100264..23100673 592..998 1885 99 Plus
3R 32079331 3R 23097907..23098397 100..590 820 77.8 Plus
3R 32079331 3R 23099574..23099664 9..99 455 100 Plus
3R 32079331 3R 23095963..23096326 183..546 425 74.5 Plus
3R 32079331 3R 23098460..23098761 594..895 415 75.8 Plus
3R 32079331 3R 23096451..23096740 611..900 400 75.9 Plus
3R 32079331 3R 23100752..23100827 1018..1091 235 93.4 Plus
3R 32079331 3R 23092179..23092417 223..461 205 72.4 Plus
3R 32079331 3R 23092756..23092814 747..805 205 89.8 Plus
3R 32079331 3R 23093972..23094091 242..361 195 77.5 Plus
Blast to na_te.dros performed on 2014-11-27 20:38:24 has no hits.

UFO10591.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:42 Download gff for UFO10591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6738-RA 39..1141 9..1103 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:03 Download gff for UFO10591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6738-RA 42..1144 9..1103 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:50 Download gff for UFO10591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6738-RA 42..1144 9..1103 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:50 Download gff for UFO10591.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23099574..23099664 9..99 100 -> Plus
3R 23099719..23100210 100..591 100 -> Plus
3R 23100264..23100681 592..1004 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:03 Download gff for UFO10591.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18925296..18925386 9..99 100 -> Plus
arm_3R 18925441..18925932 100..591 100 -> Plus
arm_3R 18925986..18926403 592..1004 98 -> Plus