UFO10596.5prime Sequence
996 bp (990 high quality bases) assembled on 2012-01-06
> UFO10596.5prime
CAGTCGACATGGTCAACGTCACGGAAGACGTCTTCGCCAACGGAGCGGTG
AATCCGTTCACCAAGTCAAAGGACACCATCAAGCGGTTCACCCTGACAAA
TGGAGCTGGAATGTCCGTGCAATTGATCACCCGTGGAGCCACCATTACCA
GCATAAAGACGCCTGATGCCAGCGGTCAAATAGATGACGTGACCCTCGGA
TTTGACGATTTGGCGGGCTATCAGAGCGAGAGAAATCCGTATTTTGGAGC
AACCATTGGGCGGGTTTGCAACCGGATTGCCAATGGCAGCTTTTATCTTG
ATGGAAAGCTAGTTCAGGTGTCTAAGAACCGAGACAACAAGTTTCAGCTC
CATGGCGGCTTTGTAGGCTTCGATAAGGCTCACTGGGAAGTTGTGGAAGT
GCGTGTGGATGGTGTTACCCTGTCCCACACCAATCCCGATGGACACGAAG
GCTATCCCGGCAAGGTGACAGCCACGGCAAGCTTTACCCTCAGCGAGGAT
AACTGCCTCCATGTCCAGATGAGTGCACTAGCAGATAAAACCACTCCCGT
GAATCTCACCAACCACTCCTATTTCAACCTAGCTGGCCACAAATCTGGAG
CCAACGGTCTCTACGAGCACACCATCGAGATAAATGCTTATGGAATCACT
GAGACGGATCAGTCTTCCATTCCCACCGGCCGTATCACACCCGTAGAGGG
AACAGGATTTGATTTACGTGTGTCAAGCAATCTGGGTGAACGCCTCAAGG
CGCTGCAGCCAGCTCGCGGGCTACGATGACAACTTTCTGTGTGACCTTCA
GTCCACCACAACCATTGGCCAAGGTGGCCAGAGCCACTCATCCGCCCAGC
GGACGCTGGCTGGAGTGGTCAGCAATCAGCCCGGAGTGCAGTTCTACCAC
CTCCAACTTTATGCAGACGTGGAACGCGGTGAATCGCCCATTCCCCGGCA
AGGATGGACCTGCCCTATGCCAAGCATTGTTGCCTTCTGCCTGGAG
UFO10596.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:37:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10467-RA | 1544 | CG10467-RA | 353..1336 | 9..996 | 4720 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:37:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6093412..6094395 | 996..9 | 4520 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:37:37 has no hits.
UFO10596.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:38 Download gff for
UFO10596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10467-RA | 342..1325 | 9..996 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:40 Download gff for
UFO10596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10467-RA | 353..1336 | 9..996 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:31 Download gff for
UFO10596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10467-RA | 353..1336 | 9..996 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:31 Download gff for
UFO10596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6093412..6094395 | 9..996 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:40 Download gff for
UFO10596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6086512..6087495 | 9..996 | 98 | | Minus |
