UFO10619.5prime Sequence
1143 bp (1019 high quality bases) assembled on 2012-01-11
> UFO10619.5prime
CAGTCGACATGTCCAGCCAGCAAAAACCCATCAATGTTTACGTGCCGCCG
ATCAGCAGTTTTCCCGAAGCCAGTTTCCTGGGTGGCTATGGACTGCAGGA
TCGCATTGAGGTGCCCAAGAGCGCGGAAGTCCTTGAGGATGTCATCGATG
AGCGGGACGCGCACTTCCTCTACGTAGTCGATAGCCAGGGACGCCTGTTG
GAGCACATACGTTACTACGGGGACGATTACCGGATGGCTTTGCGTGAGGC
CTTCACCACGAAAGTCCTTGACCAACAGAATACTGGCGCAGATCTCCCAT
TGAATCGGGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAA
CTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTT
AGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATA
TGTGTAGAAACTGCCGGGAAATCGTCGTGGTATTCACTCCAGGAGCGATG
AAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAGGTGCAACACTAT
CCCATATCACAGCTCACGTCTTTCATGCCATACGAAATCCGATGAGCATT
CATCAGCGGCAAGAATGTGATAAAGCCGGATAAACTTGTGCTATTTTCTT
TACGTCTTTAAAAAGCGTAATATCAGCTGACCGTCTGTTATAGGTAAATG
AGCACTGAACTGAATGCTCAACTTCCTACGATTGCATGTAATA
UFO10619.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:43:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32643-RA | 548 | CG32643-RA | 87..390 | 8..311 | 1520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:43:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12984610..12984913 | 8..311 | 1520 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 222..290 | 875..940 | 121 | 68.1 | Plus |
UFO10619.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:51:11 Download gff for
UFO10619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32643-RA | 54..361 | 8..317 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:37 Download gff for
UFO10619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32643-RA | 87..394 | 8..317 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:54 Download gff for
UFO10619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32643-RA | 87..394 | 8..317 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:28:54 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:59:37 has no hits.
