UFO10629.5prime Sequence
1150 bp (1041 high quality bases) assembled on 2012-01-11
> UFO10629.5prime
CAGTCGACATGTTCGAACGCTGCAATTTATTATTTATGACCATGCTGATG
GCATCGGCACTATTGACCCAAGCCCATTTCCCGGAATATTGTGCGGAATG
TGAACAGGAGGTGTGGGAACAGGTGCCGTGCAGCGAGGTGCCCACAACGG
TAGCGCCAACAACAACCGGAGGCTCTACGTTGAGCCCGCCCACAACCAGC
GCCACCAGCCCGGGACCTATTTACCCAACAACAACCAGTGCCCCACCCAC
GCCCACGGATTACACTACACAGCCATCGGAGTACAAGAAGTGCTACTGCG
AATGCAAGCTGGGCTGCAAGGAGTTCTGCCGCAAGGTGATCTCTTCTGAG
CCCAAGCAGCCGCTCACCCAGATCTCATCCATTGGGGAGTATGCCCCAGG
TGGCCAGGTGGAGTACACGCATGTCCATCAGCGCAAATACTTTCCCAAGT
ACGGAGGCGAATCCTATGGGGGATTGGTAGGACCAGTGGGCGGACCCAAG
GCCTATAAGCCATATCCATTGGTCTACGAACAGGCGGCATCAGCTGCTTC
ACCGGCTTCCATTCCCTCGGTGGCTTCCTCACCAGCGGTGGCCAGCATAG
CTGCTCCTAATTACACGCTGGAGGAGTTGGCCCAATTGCTTAGCACTGCG
TATGGCACCAAGAAGGGCTACCCAGCTAGTGTGCCAACTCCGCCACGTAT
TCAGCTTCAGCCAGCTCCCTCCGTTTTCTATTCCCCGGTTCCAAGCTACA
AAAAGCAAGTGGTTCCACTCGTGAGCAAAGTGGCGCCGGCACCCAAAATC
TCCTCCAGCATTAAAGTATGCCGCCTCAGCGGTTTCATCATCATCATCGG
GCGTGTCGGTGGCCAAGATAAAGACTCCCTACGAGGAGAAGATTGTGGTG
GCCACACCGTCTCCCATTTATGAGAGATCCACATCGTATCCTATTGTGAG
CACCCAAGAATACTGCGCGCCCCCGACGGAGTCTTATCCCGTGTGCAGAG
CAACGGAGTCGTATCCCAGCCACACACCCATATATCCAGTCCCACGATCT
ATCCCAGCAAGACTCTACCCAGCATCCCAGAGTCATATCCCAGCCACCTG
AATTCTATCAACCGGTACGGACTATCGTAACCACCGGAAATCAGCATTGG
UFO10629.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:44:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13114-RB | 1530 | CG13114-RB | 123..1252 | 9..1121 | 5070 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:44:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9546017..9547051 | 9..1038 | 4780 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:44:33 has no hits.
UFO10629.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:51:17 Download gff for
UFO10629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13114-RB | 113..1252 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:07 Download gff for
UFO10629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13114-RB | 113..1252 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:16 Download gff for
UFO10629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13114-RB | 113..1252 | 1..1121 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:16 Download gff for
UFO10629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9546010..9547156 | 1..1134 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:07 Download gff for
UFO10629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9546010..9547156 | 1..1134 | 96 | -> | Plus |
