UFO10633.5prime Sequence
1168 bp (1046 high quality bases) assembled on 2012-01-11
> UFO10633.5prime
CAGTCGACATGTACCATTCTTCAGGCCCATGTCGTGCCCACTTCAGGCGA
TCCAGTCAGCGTGATCGGTTGCCCAGGCTGAGTAGCTCGTCCACCATGGA
TGTGGCACCTCGCTTTCAGAGAATACGACGCGGGAGCACTTGCGAGGCGG
AGAGGCGAGTGGCCAAGGCGGCCCAGGACGCCAATGTGCCGCCGGCCAAG
CTCTATCTACGCTCCACCTCACGGGGATTGCGTCGTGTCCTCGAGATCTA
TATGCCACGATTCCAGCCCGACGAGCACTTGGCCAGCGCCGAGGAGGAGC
AGCGGTCAGAGGACGAACTTGGCGAGTCAGCCAGGACACGGGAGCCACAG
GAAGCTCTGCCCATTGCCACCAACTGGGCGGTGGTGAAGTGGCGGACGTC
GGATGCGGTCGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTA
CGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTC
TGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGC
GGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAAC
GGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGA
AACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAACCCTT
TAGGAAATAGGCCAGGTTTTCACCGTAACACGCACATCTTGCGAATATAT
GTGTAGAACTGCCGGAAATCGTCGTGTATTCACTCAGAGCGATGAAAACG
TTTCAGTTTGCTCATGGAAACGTGTACAAGGTGACACTATCCATATCACA
GCTCACGGTCTTCATGCCATACGAATTCGGATGACATCATCAGGCGGGCC
AGATGTGTGAATAAAGCGATAACTTGTGCTATTTCTTTACGTCTTAAGGG
CGTATATACCACCGGTAA
UFO10633.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13989-RA | 855 | CG13989-RA | 132..537 | 8..413 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6160531..6160936 | 8..413 | 2030 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:45:06 has no hits.
UFO10633.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:51:19 Download gff for
UFO10633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13989-RA | 81..493 | 1..413 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:25 Download gff for
UFO10633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13989-RA | 125..537 | 1..413 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:30 Download gff for
UFO10633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13989-RA | 125..537 | 1..413 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:30 Download gff for
UFO10633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6160524..6160936 | 1..413 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:25 Download gff for
UFO10633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6160524..6160936 | 1..413 | 99 | == | Plus |
