Clone UFO10642 Report

Search the DGRC for UFO10642

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:106
Well:42
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32428-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10642.5prime Sequence

1112 bp (988 high quality bases) assembled on 2012-01-11

> UFO10642.5prime
CAGTCGACATGGTTTTGACGAACTTCGAGTGCTGGGCACATGGTGATCCG
TCGTCGTCGGCGGCCGCCACTTTCGAAACTGGAGCGCTGCGTCCTTCGAT
GGATCCGTTCAATCCACGCGCCGTCACCTTCATGACCGACGCCAACAACA
ACAACAACAACAATGATGGCAATAACCTCGCGGCACAACCGATGCCGGTC
GTCCTGCCTCCGGAAGTCCTGCGCTGCAAGAAGCGCCTGAATCCCGGTCA
CAATCCTGTCGGGGATTTGGACACGGACCAACCGGTGTACACCAAGAGAT
GTCGCTACGACGAGTCTGACTTGGCCGCCCAGTACTGCAATGATTTCTTT
TCCTTGCCTGCCACACAAATAATTGGAACGCAGGCCTCTTTGATGGATTA
CGAGATGCAGGCCACCGGCGGCATGATGATGATGGAATCGGAGACGAGTT
TTCCAGCGCAGCAGCAGCAACATCAAGAGCAACAGCAACATCCACAGCAG
CCACATCAATATCAGCGCATTCATCAGCATTATCAAGAATCCGCAGAGCA
ACGAGTGCCGTCCCCGCAGCAAAAGTCAAGAAAATCTAATAATTCTATTG
GGAAAATCAAATTAAAGTCCATAGGCAGCGAAGCCGAAGCGGACTTGTAT
ATAGCCACACACGGCGGCAGTCTGCACCACTTTTGTGGGCTCGGCGGATC
GGAGCTAGAGGAGTCTGATATAGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGTCATTACTGGATTCTATCAACAGGAGTCCAGCGAGCTCGATTA
TCAATGACGCCCGCGCTGCCACTCATCGCAGTATTGTTGTATCATTAGGC
ATCTGCGACATGAGCATCACAACCGCCATGATGACTGATCGCAGCGCATC
AGCACCTGTCCGCCTGGCAAAATATTTGCCAATGTGAACGGGCAAGAATG
TCAATGGCCAGT

UFO10642.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32428-RC 1238 CG32428-RC 399..1112 9..722 3570 100 Plus
CG32428-RB 1804 CG32428-RB 345..873 9..537 2645 100 Plus
CG32428-RA 1213 CG32428-RA 399..927 9..537 2645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20472641..20472974 342..9 1670 100 Minus
3L 28110227 3L 20470954..20471149 537..342 980 100 Minus
3L 28110227 3L 20469800..20469986 722..536 935 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:45:53 has no hits.

UFO10642.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:51:23 Download gff for UFO10642.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32428-RC 350..1069 1..722 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:46 Download gff for UFO10642.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32428-RC 393..1112 1..722 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:49 Download gff for UFO10642.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32428-RC 393..1112 1..722 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:49 Download gff for UFO10642.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20472641..20472978 1..342 98   Minus
3L 20469800..20469984 538..722 100 <- Minus
3L 20470954..20471148 343..537 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:46 Download gff for UFO10642.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20462900..20463084 538..722 100 <- Minus
arm_3L 20464054..20464248 343..537 100 <- Minus
arm_3L 20465741..20466078 1..342 98   Minus