UFO10647.5prime Sequence
1120 bp (1002 high quality bases) assembled on 2012-01-11
> UFO10647.5prime
CAGTCGACATGTGTAATTTTCATCTTCTGCTGATTCTTGCCACAGCACTG
GGCGATTTGGCTTGTGCCACGCCCTCTCTGCGTTCCGCCTCCGATCCTGA
GAAGATCTTAAACAATCTAGCTCAACTAAGGCAGAGTAGCTTTCTGGACT
GGATTCAATCGATCCTGGGACCCGAGGTGCCAGCCGAATGGAGCTCTCCG
GCCAAAAGGGAGTGCGCAGAGTGCTCCTGTGGTAATATCAATACTCGTCA
TCGCATCGTCGGAGGTCAGGAGACGGAGGTCCATGAGTATCCCTGGATGA
TAATGCTCATGTGGTTCGGTAATTTCTATTGCGGCGCTTCTTTGGTTAAC
GATCAGTATGCCTTAACCGCTGCCCATTGTGTAAATGGCTTCTACCATCG
TTTGATCACGGTCCGATTGCTGGAGCATAATCGTCAGGATAGCCACGTCA
AGATCGTGGATCGCCGGGTTTCCAGGGTGCTCATCCACCCGAAGTACAGC
ACCAGGAACTTTGACAGTGACATTGCTTTGATTCGTTTCAATGAACCAGT
TCGTCTTGGCATCGATATGCATCCAGTATGCATGCCCACTCCGAGCGAAA
ATTATGCGGGTCAAACTGCCGTGGTCACCGGATGGGGAGCTCTGAGTGAG
GGCGGACCAATTTCTGATACCCTCCAGGAGGTGGAAGTGCCCATCCTCAG
CCAAGAAGAGTGCCGCAATAGCAACTACGGCGAGTCCAAGATTACCGACA
ACATGATCTGTGCCGGCTACGTGGAGCAAGGTGGCAAGGACTCCTGCCAA
GGAGACAGCGGTGGACCCATGCATGTACTGGGTTCCGGCGACGCTTACCA
GCTGGCAGAATCGTGTCCTGGGGCGAAGATGTGCCAAGCCGAATGCCCCG
GGCGTTATACACGAGTGGCAGCTTCATGATTGATTGCGGAGACACCAGGA
TGCCTGCTCTGTGCCCACCAGAAGCTGCTGGGACCAGCTTCCTTATGAAC
ACGAGCAGGAGAACAGAGACCCACTGCATGACACGAAGCAATCCGAGGTG
AGAGCATAGTGATGCAGCCTTCTAGAACATCGTTGGCCGCCGGCCAGTTA
AGTGTCCTAATCATATCCAT
UFO10647.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18735-RA | 1179 | CG18735-RA | 29..1025 | 8..992 | 4695 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21798183..21799167 | 982..8 | 4425 | 99 | Minus |
Blast to na_te.dros performed 2014-11-27 20:45:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc2-element | 4789 | Doc2-element DOC2 4789bp | 1358..1426 | 89..21 | 120 | 63.8 | Minus |
UFO10647.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:51:20 Download gff for
UFO10647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18735-RA | 1..1002 | 9..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:28 Download gff for
UFO10647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18735-RA | 21..1031 | 1..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:33 Download gff for
UFO10647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18735-RA | 21..1031 | 1..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:33 Download gff for
UFO10647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21798165..21799170 | 1..997 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:28 Download gff for
UFO10647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17685670..17686675 | 1..997 | 98 | | Minus |
