UFO10671.5prime Sequence
1042 bp (876 high quality bases) assembled on 2012-01-11
> UFO10671.5prime
CAGTCGACATGGCATCCCTCCATCAGAAGCGTCCCAGCATAAGTAACTGG
TTCTCCTCGCTTCGTCGGCAGCCCAAAAACAAGAAGTGCTCCCCCGGCTT
GGGAGGAAGTGAAAGTGTTGGCAGAAAGCAGCCATTGCAGAGGAGCTGCC
TTGACCTATCCACGACGCGAGTTGGTTGCGATGGTTGTGTAAGTTTGGAG
TTCTTTCAATCGGAATCCCCTGAAAGTCGGCGAAGCAACAGCACTTTCTA
TGTCAACACCCAAAATGTATCGTCTGCTGTTTTTAAAGACAATCGTCAGC
CTCTATTGGAAAGGGGCAGCGGTAGTGATAGTAGCCCTAGCAGCGTTTGC
GTTCGATGCTCATGCAATTCGATAACGAAAAGCGGGGACAGAAATGAAAC
ACCTACAATGGCCACGCCTAAGTCGGACATTAAGATCGCGCTGAAACCTC
CACCCAAGCCCCGCTCCCCTTCCATGGCTCCCTACACTAGTGTGGCTACA
TATAACATCACGAAATTAGCGCCGGACAGCCCACCCCCCGCCAGCCCCAC
ATTAAGCACTCAAACCGTAAATTGCAGCGATGTAACCACGAAGGTCACAG
AGGTACAGCGCCTACCCTGCGATGAACCCAACACTGAACTCATAAGCAAG
CGAACGGAGTACAAGCACACAACCATCACAACAACGACAAGAACATTAAT
TGTGTCGCGACCCGTGGAACTGCTTTTAAATGAAAATGGCGAAATAATCG
CAAGGCGATCCCCCCGCAAATCGCGCTCTAATTCCCTGGGCCGCATGCTT
GACGTGCAGTGATGATGCGTGTAGACGTCTGCAAATACGTCACTACCATG
TCTGGCGCATCATGTCACGATATACACAATATCAATTAACACACGACAAC
ACGGATCAGTCACATCAACGCAGACATCAGATAGTAAGTGGTGCAGCGTC
ATGATCAAAAGTCATAGAAGTACTACGCACATCTCAGAGAACTGACGATA
GGATGCTCTACATGTCGGATGCCGATCATCTACTACTAGGGT
UFO10671.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| step-RE | 4776 | CG11628-RE | 1051..1851 | 9..809 | 4005 | 100 | Plus |
| step-RD | 3095 | CG11628-RD | 583..1383 | 9..809 | 4005 | 100 | Plus |
| step-RC | 2834 | CG11628-RC | 322..1122 | 9..809 | 4005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21746455..21747255 | 809..9 | 4005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:38:33 has no hits.
UFO10671.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:50:44 Download gff for
UFO10671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| step-RD | 575..1386 | 2..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:07 Download gff for
UFO10671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| step-RC | 316..1127 | 2..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:53 Download gff for
UFO10671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| step-RC | 316..1127 | 2..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:53 Download gff for
UFO10671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21746448..21747258 | 2..812 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:07 Download gff for
UFO10671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21746448..21747258 | 2..812 | 99 | | Minus |
