UFO10689.5prime Sequence
1134 bp (1018 high quality bases) assembled on 2012-01-11
> UFO10689.5prime
CAGTCGACATGAGTGGGAGGAGTATTCAACATTCCATTGAAGTTGGGAAA
GAGCGCAGGGACATGCGACACGAAGAGGATTGCAGAATGGATGAGCGCTT
ACGGACAAGACGTAAGATCGCAAATAAACTGGAGTCTGGTGGCAAAACAG
CACATGCTTTTGAGCGATTATTGGCAATTCGCACCATTAAATTGAGCAAG
GGAAAATGTTCCGAAGACAGTGCAGAGCAGACGAAGTCTAGTGATGATTG
CAAGGCACAAACGCGTAAGGATGTAAATATCGAGGTCAAAGAGACTTATT
CCGGCGATTCCTCGCCTAACAGTGAGAGCGAGAATACAGCCCAAAACGAT
CCGCAAATGAACGTAGAAAGCGAAGAACGCGTATCCAACCTGGAACAGCT
GAGTCGAGCAGTGTTAAAACGGAACGACATAAAGAACTTACTGGGTAAAC
CTATTTTCGCGGAGGCTGTGATCGGATCCTTTGTGCGGATAAATGTTGGA
AAAGTCTACTCCATCTACGAAACTATTGCTCTGCATCAGGACAGTAAGGA
CTACCGGGTAGACGGTAAGCGTACCAATCTGACCCTGGTCTTGAGGTGCG
GTTCCGAAAAGCGTTATTCACGTATAGACGTGGTTTCAAATCAGCCAATT
ACACAAAAGGAATTCTTGTTGTGGTTGGAAACCAATCTGCGCAATCGATG
CACTTTACCAACGCTTAATGACATCGCCAAAAAACAGGTGCAGGTAAAAA
ATGCCTGTAAATACTCGTACACTGAAACTGATGTGGAGAAGCTGATTCAA
GACAAAAAAGAAGCTGGTATAAAACAGAATGCCGCTTACAGAAAAATTAG
TCTAATTATAGAGCGTGATATGGCAGCGGGTATGAACGACGTGAAAAAGT
GCAAGTGTTGAGAAGAAAATCCTAGAGATCGACGAGGAACCAGACCCCAG
ATCGAAAAATCTGGCCAGCATCGGTACCAGTCCTAGTCTACACGCCGGGT
CCATGTGCCTACCATTTACGCACGAGTTGGGTGTGCCTTCGGCGCAAAGT
CTTGTAGCGAACGCGAGCCCGAACAAATGGATGGAAAGTATATGGCGACG
AAGTTAAAAATGCTGTATCAGTCGCAGTTCGAAT
UFO10689.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:40:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31702-RA | 1710 | CG31702-RA | 76..1225 | 9..1128 | 5005 | 97 | Plus |
| CG31703-RA | 1727 | CG31703-RA | 97..1246 | 9..1128 | 4945 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22071219..22072262 | 9..1040 | 4750 | 98.6 | Plus |
| 2L | 23513712 | 2L | 22103262..22104305 | 1040..9 | 4690 | 98.2 | Minus |
| 2L | 23513712 | 2L | 22066516..22067157 | 86..727 | 3030 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:40:30 has no hits.
UFO10689.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:50:55 Download gff for
UFO10689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31702-RA | 60..1120 | 4..1048 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:06 Download gff for
UFO10689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31702-RA | 69..1129 | 4..1048 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:40 Download gff for
UFO10689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31702-RA | 69..1129 | 4..1048 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:40 Download gff for
UFO10689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22071212..22072272 | 4..1048 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:06 Download gff for
UFO10689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22071212..22072272 | 4..1048 | 98 | | Plus |
