UFO10690.5prime Sequence
1144 bp (1031 high quality bases) assembled on 2012-01-11
> UFO10690.5prime
CAGTCGACATGCCGTTTGTGACGCCCCGTGCGGGGACAAGCAGTGCAAGC
AGTGCGCCCGGCGGACGCACCACGTTCCGTCCGCCATGGGTGAAGGACGA
CGGCGGCACCAGTGGCACCAGCAGTACCACAAAGCCCACTGCCACTCCGT
GGGCAAAGAAAACAGCGACGACGACGACCGCCTCTCCGGCAACAAAGGAA
AATGGAGAAAAGCCGACTGTGGCCAAACCAAAAGCAACTGCTACCACGAC
TGCAGCCGCGAGGAAGACTTCGACCCCTGAACCGGCTAAGAAGACGATAG
AGCCTGTAAAGAAATCTTCACTGGCCACAAGCACAACGGCGGCCAAGAAG
ACACCAGAACCCGTAAATACCAAGAAAGCACCGGAGCCAATCAAGAAAGT
GGCGCCCACCGTGGGGCCCAAGAAGCCAGTAGCCACCACTTCAGCGCTCA
AAAAGAAGAAGGAGCCGACACCACCACCCGAATCCTCCTCCGAGGAAGAA
GAAAGCGAGGAGGAGGAAGAGACCGAAGAGGAAACCGAGTCTGAGGAGGA
GGAAAGCGAAGAGGAAAGCGAGTCCGAAGAGGAGGAGAGCGAGGAAGAGG
ACACCACCGTGGACGAGAAGGTGCCCGAGCACGTGAAGAAGGCGGCCCAA
TTGCGACCCACCACCGTGAACAAGAAGCCGGAACCGGAAAGTGAGTTGAC
CCAACGTTTTACCATGGAGAAACCCAAATTACGCAGCGTGGTGGTCAAGC
GGGATAAGTCCTTGAAAAAGATGGCCACCGAAGACGACGACGAGGCCGAG
GAGGGCGAAACGGAGGAGGAGCGCGACCGGCGGCGACGTTTCAAATTAGA
GAAGCCCAAGCTGCGGCATGTCAAGCGCGAGGAGAAGCCTTTGCCCAGCA
AGAGCACCGACGACCTGGCCAAATCCGGGCCCGTGCTCAAGAACGTACCC
AAGATCGATGAGCTCCCTCAAGGAGCCGAAGGAGGAGCCAAGCCCGAGTC
ACGGACCAGACCCTACGCAAGCGTCCATTAAGGCGCGAGCCGAGCATCAG
ACGTCCCGCCCCGCCCGCCGCTGCCCCTCGCCTGTGCCCAAGACCCGCCA
CCGCCGGCCCCGTCCTAGCTTCCGGTGGAAAAGAAGTGCTCAGC
UFO10690.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:40:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sals-RF | 3272 | CG31374-RF | 235..1378 | 5..1144 | 5140 | 97.5 | Plus |
| sals-RG | 3294 | CG31374-RG | 257..1400 | 5..1144 | 5140 | 97.5 | Plus |
| sals-RD | 3314 | CG31374-RD | 277..1420 | 5..1144 | 5140 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11447125..11448170 | 1049..5 | 4840 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:40:37 has no hits.
UFO10690.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:50:56 Download gff for
UFO10690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sals-RD | 268..1404 | 1..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:10 Download gff for
UFO10690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sals-RD | 271..1407 | 1..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:42 Download gff for
UFO10690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sals-RD | 271..1407 | 1..1130 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:42 Download gff for
UFO10690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11447119..11448171 | 1..1053 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:10 Download gff for
UFO10690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7272841..7273893 | 1..1053 | 98 | | Minus |
