UFO10691.5prime Sequence
1139 bp (983 high quality bases) assembled on 2012-01-11
> UFO10691.5prime
CAGTCGACATGTTGGACGATGACAACTCAGATCTGCTGGTCTGTGCATCG
GAGATGCAGGAAGACCGATTATACTTTGTGGCCTTCAAGAAGAACATCAA
GCCAAAGAACACGGTCAACACCCACTACTTCAGCGTCGATGAGGAATTCA
TCTATGAGAACTTCTACAATGACTTTGGTCCGCTCAACATATGCATGCTC
TACAGATACTGCATGAAACTGAACACCAAGCTGAATGCCAAGTGCCATGC
CAACAAAAAGATAGTTCACTACACCTCCATGAATCCGGCCAAGCGGTTGA
ACGCGGCCTATCTGATTGGTTCGTATGCAATAATCTACCTTAACAAGACA
CCACAAGAGGCATATCGGCCGCTGGTCGCTGGCGAGATTCCTGCCTACAC
GCGCTTTTGTGACGCCAGCTACGGACCTAGCAACTTTAAGATTTCGTTGC
TGGACTGCCTGAATGCTGTGCACAAAGGCCTGCAGGCGGGATTCTTTAAT
TTCAACGACTTTGATGCTGAGGAGTATGAGTATTTCGAGCGCGTGGAGAA
CGGCGACTTTAACTGGATTGTGCCCCAAAAGTTTATAGCGTTTTGCGGGC
CCCATCAGAAGAGCAAGACGCTGCCGAATGGATATCCGTGCCATGCACCT
GAGCGCTACTTTAGCTATTTTCGGGATAATAATGTGACAACAGTGATTCG
GCTGAATGCCAAAGTCTATCACGCATCGTCCTTTGAGAACGCTGGTTTCG
ATCACAAGGATTTGTTCTTCATCGATGGCAGCACGCCCAGCGATGCCATC
ATGAAGAAGTTCCTCTCCATTTGTGAGACGACAAAGGGAGCCATTGCAGT
TCACTGCAAAGCGGGCTTGGGACGCACGGGCAGCCTGATAGGGGCATATA
TCATGAAGCATTACGGATCCCACTGCTCCGGAGGCCATAGCCTGACTAAG
CTTTGCCGGCCGGGATCGGTGATTGGACATCAGCCGCAGTTGATGGAGAC
AACAGCTGCTGTGGTCGGAGGCGAACGATTGCGCGCGCACTTCGCTTCCA
TCCTCCACATACGTACGGTATCCACAGCCTGGAAACTGAGAAAAACTTGC
CTCGCTGCCCGCCGATTCAAGAACAGTCGAATCTGCTTT
UFO10691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:40:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cdc14-RE | 3305 | CG7134-RE | 591..1734 | 9..1139 | 5085 | 97.3 | Plus |
| cdc14-RD | 4568 | CG7134-RD | 591..1734 | 9..1139 | 5085 | 97.3 | Plus |
| cdc14-RC | 3985 | CG7134-RC | 591..1734 | 9..1139 | 5085 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7805856..7806523 | 997..330 | 3170 | 99 | Minus |
| 2L | 23513712 | 2L | 7806653..7806924 | 333..62 | 1345 | 99.6 | Minus |
| 2L | 23513712 | 2L | 7806990..7807044 | 63..9 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:40:45 has no hits.
UFO10691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:50:56 Download gff for
UFO10691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc14-RC | 577..1691 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:14 Download gff for
UFO10691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc14-RC | 583..1697 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:45 Download gff for
UFO10691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc14-RC | 583..1697 | 1..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:45 Download gff for
UFO10691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7805853..7806523 | 330..999 | 98 | <- | Minus |
| 2L | 7806657..7806922 | 64..329 | 100 | <- | Minus |
| 2L | 7806990..7807052 | 1..63 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:14 Download gff for
UFO10691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7805853..7806523 | 330..999 | 98 | <- | Minus |
| arm_2L | 7806657..7806922 | 64..329 | 100 | <- | Minus |
| arm_2L | 7806990..7807052 | 1..63 | 93 | | Minus |
