UFO10692.5prime Sequence
1166 bp (938 high quality bases) assembled on 2012-01-11
> UFO10692.5prime
CAGTCGACATGGCACTGGTGCACACTTTCCTGGGCACCTGGGAGATTGTC
TGCTGCACCTTCGAGGGAAAACGAGAGCTGTCCGGTCTAGAGGGCATCAA
GTTCCGCCTGGATGACACCAGTGACATTACGTGGTACAACGATCTGGTCA
GCCCGCTTCCGGAATCGAAAGACTGTGGCAACTTTTGCGAATCGGCCAGT
GTTCTCTTCAGCTGCGAGACCTTCGATGTCCACGAGATCAATCCGCGCCT
GGTCTTCGGCGCCTTTGCCGGCCACAGCATCGAGTTCAGCACCAACACCT
TAACGCCGACTGATACGCTGGTTCTCAGCTGCGAGAACTGGTATGCCGTG
GAGTGCAAGCGCCTGCAGGACAATCAAGCCGCTGGTCAGGAGAAGCAACT
GAGCTTCGGCGAGGCCCTACAGGAGTCCTACTTTAGCGATGTGATGGTGA
AGAGCTCCAGTGGCCTGGAGTACGCCCTGCACGCCTCCATACTGCGACTC
AATGGCTTCGATTGCAGCATGTGCGTGAACAGTGCCCCGTCATCGGCTGC
CGCTCGTCCTGCGGCCAGGTCCTGTCACAGTGGTCCGAACACCCCGAATC
CCATACGCATCTCCGTGGCGCCGGCGTCCAACGACGATGGGCATGAGAAG
TCCCTGCCGCGTCTGAATCTCTCGCCCATCTATCTGCAACCGCCGTGCGA
CTTTCAGACCATGCCCTCGTCCGGATTGGGCGCCCAGCGCGTGCATCATT
TCAGCAGCAGCTTCAATTGCCCTGAGCAACGGCACCGCCGGGGACTCGGA
GTCCGTGGGTCAGGACCACGGGTCTGCTGAGCCTCGAATGTGGCGGCGGT
GGCGGTAATGTACCCGTCTGCCGCCCACTTCGCATTCGGGATTCCCCACC
TGGAGACATCGCCAGTCGCTGTTGCAAGAACAATCTTTTAACTTTCTGGC
AAGAACCTGATGCTGGCAGCCAACGCCCCCATTCCCCTTGCCGCCGAACA
ACAGGTCCTGGCCATTTGCAGCCATCCGGAGGCAACCCACTAATCGCCCG
GAACCGTGGCCTCCGAAGTCCCTTCCGCCCTTTTCCCAAGCTCCCAATGG
AACACACCCCGCCCATCCGTCCCCGGCCCTGAACGCCCGGGTGGGGGCGT
TGCGTTGGTGTATATC
UFO10692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:40:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7058-RB | 4548 | CG7058-RB | 295..1354 | 5..1094 | 4545 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18807474..18808089 | 291..912 | 2755 | 98.1 | Plus |
| X | 23542271 | X | 18807204..18807400 | 94..290 | 985 | 100 | Plus |
| X | 23542271 | X | 18807102..18807153 | 43..94 | 260 | 100 | Plus |
| X | 23542271 | X | 18806988..18807027 | 5..44 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:40:52 has no hits.
UFO10692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-11 09:50:57 Download gff for
UFO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7058-RB | 291..1325 | 1..1058 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:17 Download gff for
UFO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7058-RC | 291..1325 | 1..1058 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:48 Download gff for
UFO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7058-RB | 291..1325 | 1..1058 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:48 Download gff for
UFO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18806984..18807027 | 1..44 | 93 | -> | Plus |
| X | 18807104..18807153 | 45..94 | 100 | -> | Plus |
| X | 18807205..18807400 | 95..290 | 100 | -> | Plus |
| X | 18807474..18808218 | 291..1058 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:17 Download gff for
UFO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18701017..18701060 | 1..44 | 93 | -> | Plus |
| arm_X | 18701137..18701186 | 45..94 | 100 | -> | Plus |
| arm_X | 18701238..18701433 | 95..290 | 100 | -> | Plus |
| arm_X | 18701507..18702251 | 291..1058 | 95 | | Plus |
