UFO10701.5prime Sequence
1083 bp (861 high quality bases) assembled on 2012-01-17
> UFO10701.5prime
CAGTCGACATGTTTCGAATCTCTGGCCTTCTGAGTTCACTCGTAGTCCTT
ACTTTTGTTCTGGAAATCAGTTGCCTGGAGAATGGCACCCTGGCCAAGCT
GAAAAAGTTTGTGAACTGTGAGTCTAAGGCTTACAAGTCCAGCAATGCGA
TCTACAAGGATTACTGGGTGCTGGAGAACTATGTAATGGCTGATCACGGC
GATATTCCGTGCTATTCGAATGTGACCTACACCACCCATGCGGACTATAC
GTATCTGGATAATGTGGTGCCGCTCCTGGAACGCTGGCGATCGCCCCTCA
GCCTGGCCATATATGCTCCTGGCACGGACTTCGAGCCCACTATACACAGC
ATTTTGTACCTGCTGCAGTGCCATCCTGGCCACGACCTGGTTCGCCAGCT
GTGCAGCATTCATTTGTACTTCGATGTGGAGCACTTGCCCCAGGTGGTTC
TGCCACCCGAAACGACTCTAAGGGAGCCAGCCAACTGTAGTGGACCACCG
CCATATGAGAATGTCGTTAAAGGGAACATGTACAGGTCTCGAAACACACT
GGATTATCCCGTCAATATGGGACGCAACGTTGCACGCCGGGCTTCGCTGA
CGCACTACGTCCTGGCCTCGGACATCGAGCTCTATCCCACGCCCGGATTG
GTGCCCGACTATATGCATTTTCCTGGCCGCCAAGTGATTGGAATTCCAGG
ACAGCAGCCTACTTCGCCGTTGGTCCATGTACTGCGGATTTTCGAGGTAA
TGGCCATGTATCTGTACCGAACACCCAAGCCATAGTTGCCAGAGATGTTG
AAGTCGGCCGAACCTGTTGCCATTTTCACATGGACATCTGTGAGGCGTGC
CATAGGGGACCCAACCTGTAAGGAGTGAAAAATGCCAGCGTTGTGTCCAA
GGAACTGAATGTCTCAATGTTGGCCACCGCTCCGAAAATAACACATTGGG
AGCCATATTTTTTGGCCACGTCGAGGATCCTTCATACGATGGACGATTAC
GTGGGGAGGTTCAACGGGACAGGATGACCAGAGCGTATGCCATGTGCGTT
CTGGACTACTAGTCCCAATTCCTGGAACAAGGC
UFO10701.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:55:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15483-RA | 1382 | CG15483-RA | 49..1118 | 9..1076 | 4595 | 96 | Plus |
| CG9171-RG | 3950 | CG9171-RG | 1170..1347 | 164..341 | 205 | 75 | Plus |
| CG9171-RF | 3736 | CG9171-RF | 956..1133 | 164..341 | 205 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:55:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12761116..12761792 | 685..9 | 3325 | 99.4 | Minus |
| 2L | 23513712 | 2L | 12760610..12761004 | 1076..684 | 1055 | 88.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:55:50 has no hits.
UFO10701.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:30 Download gff for
UFO10701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15483-RA | 49..1121 | 9..1080 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:01 Download gff for
UFO10701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15483-RA | 49..1121 | 9..1080 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:54 Download gff for
UFO10701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15483-RA | 49..1121 | 9..1080 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:54 Download gff for
UFO10701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12761118..12761792 | 9..683 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:01 Download gff for
UFO10701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12761118..12761792 | 9..683 | 99 | | Minus |
