UFO10703.5prime Sequence
1133 bp (940 high quality bases) assembled on 2012-01-17
> UFO10703.5prime
CAGTCGACATGATCACTCGAGTCAATCGGCGCCGGCAGGCCTTTTGGTGG
CAAATCTGAAGTCTTGGGAAACTTTCGACTGGCCGACGGAGCAGCAGCGT
TGGATCTACCGCAGTTGGGGTCAGTACTTTGCGCGGATGCGGAAGAACAC
CTTTGCCCAGAAGTACTTCGACAAATGCATCACAGAGAATGAGAGCACGG
ATCACAAGGCTCTTTATCTGCGCAGCAAATTCAAGAGATCGGTGGCCCTG
ACGCAGGACGCATTGGAGGATAGTTTGAGGGCCATGGAGGTAAGGCAGGC
GTGGGACGCAAATGTGTCCATGGAGCTCGGAGATGCGCTCTACGATTTGA
ATCGGTTTGAGGAGAACAAGAGCCTGCTGCACGACAATGTCCGTCGGCAT
GCGGGCACCGCTCTAAAGAGCTTCGAGAATCGCCTCGTGGTAGTCGATGA
GAATCTCAAGGATTGCACGGGCTTCAGCCTGGCCAACTTCTTCATGGAGC
ATTCCGCGCAGCTGCCCGGCTTCTATGCCCATCAGCAGGAGGAGCTTCGA
AGGGCCGACAGGCGGCCGCTGTGGAAAATCCTCAAGGAGCGAAAGGAGTG
TGATGTCCAGAGCAGGATCGATCGCAAGGAGGTGATGCTCTTCCCACTGG
AAAGAGAGCGCAGGCGTCGCAAGACCAAGATATTTTATCAGAACTATTTG
GGTCGCAGCTGGACCGATTTTTTCTTTCTGAAAACACTTCGCCGGCATCC
CAACTGTCTTCTAGACAATCATTTCGGCTCCTCGGCGGACCGCACCAAGT
ATCTTGAGTATGCCGTTCAGCGCCTTAAGACCTTCACACGGATGCTCCAG
GCAAGAGACCCATGTACAAGGAGTACTTCCATCGGAATCCCCAGATAGAG
CTCGAATGCGGGATGCGAACTTGTTCCGGATCCAGTACCAAACAAGCCGA
ACATGGTGAGCATCCTGCGACCATTAAGGTGCTGCGGGGCGGAATGATAT
CAGCGCCTGCCTAGTTTTGTGGAGATTGATGGTCAGCTCTGGTCATCAAG
ACAATCGACTGATGCCTGGAGCGAATTCATGACCAGGTACAACAATCTGT
CCTCTAATGTGCCAAGTATTCGCCCTGCCCCCA
UFO10703.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| r-cup-RA | 2140 | CG10998-RA | 106..1208 | 15..1099 | 4810 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21024791..21025783 | 1002..15 | 4550 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:56:06 has no hits.
UFO10703.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:31 Download gff for
UFO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| r-cup-RA | 97..1217 | 6..1110 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:09 Download gff for
UFO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| r-cup-RA | 97..1217 | 6..1110 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:00 Download gff for
UFO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| r-cup-RA | 97..1217 | 6..1110 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:00 Download gff for
UFO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21024789..21025792 | 6..1003 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:09 Download gff for
UFO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20895816..20896819 | 6..1003 | 98 | | Minus |
