UFO10708.5prime Sequence
1149 bp (1027 high quality bases) assembled on 2012-01-17
> UFO10708.5prime
CAGTCGACATGCGATTCCTAATTGTCGTTGCTCTTGTGGCCTTTTTGGCT
GTTGGTCTTGTGGCTGCACGGCCAGCTGAGGATGAGGAGTCCTCCATCCA
GGATAACACCAATGAGGATTCGTCCAGTAATGATGGCGAGGGAAACTCCG
ATGCTGCCGAGGAAGAACCTGCTGTTGAAGAAAGTCAAGATTCTGGAAAT
GTGGATAACCAGGATGATGAAAATAGCGAGGATAATCAGGAGGAGTCAGA
TAATGAATCAAGCGGAGATGATGAGGAAGATAACAACGGGTCTGATGATA
ATACCGAATCGGATAATAATAACGATTCAGAAGGCGATCAGGAGCAGGAT
GCTCCACCCAACAACCAGATTCGACCATTCGGACCTCTTCTCATCCAAGC
AAGGCCCCTTTTCCTCGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATTTTTCTCATA
AACCCTTTTAGGGAAATAGGCCAGTTTTCACCGTAACACGCCACATCTTG
CGAATATAATGTGTAGAAACTGCCGGAAATCGTTCGTGTATTCACCTCCA
GAGCGAATGAAACGTTTTCAGTTGCTCAATGGAAAACGTGTAACAAAGGG
TGAACACTATCCAATATCACAGCTCACCGTCTTTCATTGCCATACGAATT
CGGAATGAACATTCTATAGCGACAGATGTATTAACGCAGATAAAACTGT
UFO10708.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13461-RA | 560 | CG13461-RA | 16..426 | 9..419 | 2055 | 100 | Plus |
| CG12310-RA | 544 | CG12310-RA | 42..128 | 9..95 | 255 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15052065..15052475 | 419..9 | 2055 | 100 | Minus |
| 3L | 28110227 | 3L | 15050679..15050765 | 95..9 | 255 | 86.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:56:35 has no hits.
UFO10708.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:35 Download gff for
UFO10708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13461-RA | 16..429 | 9..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:27 Download gff for
UFO10708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13461-RA | 16..429 | 9..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:15 Download gff for
UFO10708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13461-RA | 16..429 | 9..423 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:34:15 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 18:06:27 has no hits.
