UFO10718.5prime Sequence
1137 bp (1026 high quality bases) assembled on 2012-01-17
> UFO10718.5prime
CAGTCGACATGACTAGCTTTCGGGAAATGCGTTTCGATGATTTGTTCAAA
ATTAATTCACTAGTTTTCGATGCTCTCACCGAGGTTTATAGCCTGACCTT
TTTTGTAAAGCATTTTTTGGAGTTTCCAGGACTCTCACAGATTGCCATAG
CTCCAGGTCCTGATGGCAGACCCATGGGATATATATTCGGGCAGTATCAG
GTCAAGCGCAACCAGGATCCCTATGGTCATGTGGCAGCATTGACTGTATC
TCCGGAGTACCGACGCCTTGGACTGGCCACTGCTCTAATGGATTTTTTCT
TTATGGTCTCAGACCTTAAAGGAGCTTCCTATGTTAACCTCTTTATGCGA
ATCAGTAATCGGGCTGCCTATCAATTGTACACTTCTTTGGGTTATGCTCA
TCGCCAAACATTCCTGGACTACTATCCGGATGAACCGAAGCCAGAAAGTG
CCTACGAATTGAGAAAGTACGTTCCCCGCCCCATGGAGGTTCAAGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
TTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCA
ATATTGGCCACGTTTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCT
GAGACGAAAACATATCTCATAAACCCTTAGGAATATGCGCAGGTTTCCAC
CGTAACACGCCCCACCTTGGCGAATATTTGGTGAGAACCTGCCCGAATCG
TCTGTTATTCCTCGAAAGCGATGAAAACGTTTCCAATGCTCATGAACGTG
TAACAGGGTGAACCTATCATACACGGCTCACGTCCTT
UFO10718.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31730-RA | 680 | CG31730-RA | 109..594 | 9..494 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:57:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13259150..13259635 | 494..9 | 2430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:57:38 has no hits.
UFO10718.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:40 Download gff for
UFO10718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31730-RA | 1..497 | 4..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:01 Download gff for
UFO10718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31730-RA | 1..497 | 4..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:43 Download gff for
UFO10718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31730-RA | 104..599 | 1..500 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:43 Download gff for
UFO10718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13259150..13259639 | 1..494 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:01 Download gff for
UFO10718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13259150..13259639 | 1..494 | 99 | | Minus |
