UFO10719.5prime Sequence
1154 bp (1025 high quality bases) assembled on 2012-01-17
> UFO10719.5prime
CAGTCGACATGCCACTGCTGGAGGCACCTGCGGACTACCTGGAGTCCTCT
CCGGATCAATCGCTTCAGGCGGAACTGCCCATCCTTCTGGCACCGCCAGG
ACCGGCCGCCTTGGCCCAGGTCCGGATGCCTCCGCCCGAGGTGCGGCTCA
ATCAGCAGAATCCCGCACAGCAGCAGCAGCAGCGGATGCAGTTCAACCGC
CGCCAACTGGGTCGCCGGAACTCCTTCGATCGGGATGTGGCCATTGCCGA
GGAGGAACAGCACCTTCCGGCCTTCGTCCACCTGCTGCCCGTGGTGCTAC
CCCAACAGGGCCCGGAACCGACACTGGACGAGCTACTGCGCCGAGTGACG
CAACGCACGGATCTGGAGGCGGTGGAGCAAGTGCGTCTGCGCGTGATCTC
TTACACAGTCAGCCTGTCCCGCCTGTCGCTCTTCCTGCCGCGCCTCCAAT
CCCTCGACCTGAGTGGCAGTGTGCTGAGCTCCCTGCGCGACCTGGGCTAT
GGACTCCTCCAGCTAACCCGGTTGGACATCAGCAACTGCGGCCTGAATAG
CTTCGACGGCACCAGTGGACTGCCGGCCATCCGTGTGCTCATCGCCGATG
GAAACATGATCCAGCGGGTTGATCCGCTGGCCGAACTGGTCCACCTGCGC
GTTCTCAAGGCAAGGAACAACCGGATCAGTGAGCTGGGCCTGCTCTCCTT
CTTGGGAATGTGCCCGCAGCTGCAGAGGTGGAGTTGCAGGGCAATCCCGT
GTGTCGTTTACCGCTCTACCGCTCGCTCCTGGCGCGCAGTGTGCCCACGT
TGCAACTGTTGGATGGACGGGTGTTGAACGGTGAACCTGCTCCGGTGGAG
ATGGAGGAGGCCACATCCCCGGCATCAAGTGATCTGGAGTCTGGCTCCGA
GACGACTGCACAACGGCGAACACGGCGCCTGCTCCGGAACCCGTCTATCG
CTGAATGCTGCCATCCGGCGCCAGTGTCGGCCAGCTTCTGGCTCACTCAG
TGGCCGGATCGGTTTTGAGCTGGTGCGCCAGCGCGAGGCCATTGCCACGC
TTGGGTCAGTCTCTCTTCAGCGGATCGTCTCGGCTTCTCTGCCGATCCAG
CGGCGCATCATGACTCTGTCCTCAACGAGCTCGACGTCATCTTGCTTCCA
TTAT
UFO10719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:57:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14185-RA | 1397 | CG14185-RA | 28..1138 | 9..1099 | 4975 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20106517..20107221 | 338..1033 | 3055 | 97.9 | Plus |
| 3L | 28110227 | 3L | 20106121..20106450 | 9..338 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:57:47 has no hits.
UFO10719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:41 Download gff for
UFO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1138 | 9..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:05 Download gff for
UFO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1138 | 9..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:47 Download gff for
UFO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1138 | 9..1099 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:47 Download gff for
UFO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20106121..20106450 | 9..338 | 100 | -> | Plus |
| 3L | 20106518..20107298 | 339..1099 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:05 Download gff for
UFO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20099221..20099550 | 9..338 | 100 | -> | Plus |
| arm_3L | 20099618..20100398 | 339..1099 | 96 | | Plus |
