UFO10721.5prime Sequence
1158 bp (1025 high quality bases) assembled on 2012-01-17
> UFO10721.5prime
CAGTCGACATGAAGGCAGCAATAATTTTGGCACTAATCGGTACAGTTTTG
ACGGCTCCGCCAGTCAGGGTGATGCCGAAACCAGGCAGTGAGCTTGATCA
GTACGCTCACATATTTGCAAAGGTACGACCACCGGGCCAGAAGCACCAGA
ACATGGAGATTGAATTCCAGCCACAGCACCACAACTCTCTGCCGAGCAAC
CAGGTCAATGCGGAAATCAATCATGTGGAGCCCAAGCAGCCTCAGTACAT
GGAACAAAGTTCTTCTCAGGTCGAGTCGAGACCTCCTCACACCGTGGACT
TTGAGATCAAGCCGGTGGAGCAGAAGCCACCCCAGCGATTGGAGTTTGAG
GTGAAGCCGCAGCACGAGCAAAACTCTCCTCAGGGACATTTGGTTTCTTT
GGGCGTCAAGCCCGTGGAGCAGAAGCCACCTCAGCACTTGGAGGTGGAGA
TTAAGCAGCAGCAGCAACAACATTCTTCGCAAAATCATCAGGTGGAACTG
GAAATCAAGCAGGTGGAACAGAAGCCTCCACAGCACTTGGAAATTGAGAT
CAAGCCTGTTGACCAGAAGCCACCGCACCGTGTGGAGCTTGAAGTCCAAC
AGCAGCATCACCAAAACTCTGCCCAGGGACACTTGGTTTCTTTGGGAGCA
GTGGAACAGAAGCAACAACACATCGATCATGAGCTGAAGAATTCCCATAA
AATCGAGCTAGAATTTGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCACAGAGTCCAAGCGAGCTCGATATCAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTTGTATTCATTAGCAT
TCTGCGACATGCGCCATCACAAACGGCATGATGAACTGATCGCCAGCGCA
TCAGCACCTTGTCGCCTGCGAATATATTTGCCAATGTGAAACGGGGGGAG
AGTGTCATATTGCACGTTTAATTCAACTGTTGAACTCTACCCCAGGGGAT
TTGCTCGC
UFO10721.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:58:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12934-RB | 943 | CG12934-RB | 25..735 | 9..719 | 3555 | 100 | Plus |
CG12934-RA | 858 | CG12934-RA | 25..735 | 9..719 | 3555 | 100 | Plus |
CG12934-RB | 943 | CG12934-RB | 317..419 | 544..646 | 230 | 81.6 | Plus |
CG12934-RB | 943 | CG12934-RB | 560..662 | 301..403 | 230 | 81.6 | Plus |
CG12934-RA | 858 | CG12934-RA | 317..419 | 544..646 | 230 | 81.6 | Plus |
CG12934-RA | 858 | CG12934-RA | 560..662 | 301..403 | 230 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:57:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10648912..10649622 | 9..719 | 3555 | 100 | Plus |
2R | 25286936 | 2R | 10649204..10649306 | 544..646 | 230 | 81.6 | Plus |
2R | 25286936 | 2R | 10649447..10649549 | 301..403 | 230 | 81.6 | Plus |
Blast to na_te.dros performed 2014-11-27 20:58:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6810..6996 | 418..610 | 177 | 56.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6888 | 454..616 | 162 | 57.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2353..2509 | 454..613 | 161 | 59.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2559 | 418..634 | 156 | 55 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6934 | 418..632 | 149 | 53.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6739..6858 | 416..535 | 133 | 59.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6946 | 418..572 | 131 | 56.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6760..6876 | 416..535 | 125 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2594..2684 | 416..508 | 118 | 61.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1065..1143 | 454..535 | 115 | 62.2 | Plus |
UFO10721.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:41 Download gff for
UFO10721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12934-RA | 22..740 | 1..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:10 Download gff for
UFO10721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12934-RA | 17..735 | 1..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:51 Download gff for
UFO10721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12934-RA | 17..735 | 1..719 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:51 Download gff for
UFO10721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10648904..10649622 | 1..719 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:10 Download gff for
UFO10721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6536409..6537127 | 1..719 | 99 | == | Plus |