UFO10722.5prime Sequence
1014 bp (514 high quality bases) assembled on 2012-01-17
> UFO10722.5prime
CAATCCACATGTTGGCCACCGGTTTTCTGGCTCGCAGAACCGTACTTAAC
CAGCCGGCGTTCAGTTCATGGAGCACACTCCTCCGGACCGCTAGAAAACG
ACCCCCATCCACGGTTGCCGCCAGAGTTCCTTTAAAGCTTCAGTCACAGC
ATCAATTTACAAGAGCATACTCGTCCTCCAAAACCATGGACACGCCGGCG
GATGTATTCCGCGGCATTACGGATCGATTTGCCGGAGTAACAGTCGATGG
GCGCGAGGAGAACGTGGACAAATCCAGTTTCCGGGACAAGCTCACAAAAT
CCCTGGACTTTTGGACGACGAACAAGAACCGGGCCATTTGGTTCCGCGTG
TACAAGGAGCAGGCTGATTGGGTGCCCATTCTGGCGGAGAACGGCTTTGA
TTTCCATCATGCCAAGACCGGTGTGGTGGTCATGTACCGCTGGTTGCCGG
AGCACGAGTCTAGCAACCTACCCACCTACACCCACACGCTAATGGGCGTC
GGCGGACTGGTTATCAACGAACAGGACGAGGTGCTGGTGGTGTCCGATCG
TTTTGCAATGATACCAAACACCTGGAAGCTGCCCGGCGGCTATGTGGAGC
CGCGGGATCATCTCATCGATGCGGCAATACTAAAGGTGGCCGAGGAGACG
GGAATCCGCACCGAATTCCGCTCAATGGTCACTCTGCGGCATGCCCATGG
CGGGACCTTCGGCTGCTCCGACATGTACGTGGTCATCGCCCTAAAGCCGC
TGATTTTGACTTTACGCGCTGCGAACGCGATATAGCGCGCATCCAGTGGA
TGCCCATCGCGGAGTATCTGAAGCATCCTCAGGCCCACGAGACGAACAGG
CATTTCGTCTGCATCTTTTTGGGACTACCAAAACGCGGACTGACCCTCAC
TTGTCGCGACGAAGTGCATCAAGAAGCAAATAATACATACATCTGTATAC
GTGATCGCGAGCACCCCAGGAGCACTAGATAACAAGAATCCGGCAGTTTC
TAGACATTCGTTTG
UFO10722.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8128-RB | 1809 | CG8128-RB | 648..1634 | 9..989 | 4200 | 95.7 | Plus |
| CG8128-RA | 1530 | CG8128-RA | 369..1355 | 9..989 | 4200 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15699162..15699786 | 298..921 | 2695 | 96.5 | Plus |
| X | 23542271 | X | 15698521..15698687 | 9..175 | 775 | 97.6 | Plus |
| X | 23542271 | X | 15698760..15698881 | 176..297 | 610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:56:41 has no hits.
UFO10722.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:35 Download gff for
UFO10722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8128-RA | 353..1279 | 3..930 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:31 Download gff for
UFO10722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8128-RA | 364..1290 | 3..930 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:34:18 Download gff for
UFO10722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8128-RA | 364..1290 | 3..930 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:34:18 Download gff for
UFO10722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15698516..15698687 | 3..175 | 95 | -> | Plus |
| X | 15698760..15698881 | 176..297 | 100 | -> | Plus |
| X | 15699162..15699794 | 298..930 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:31 Download gff for
UFO10722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15592793..15592914 | 176..297 | 100 | -> | Plus |
| arm_X | 15592549..15592720 | 3..175 | 95 | -> | Plus |
| arm_X | 15593195..15593827 | 298..930 | 95 | | Plus |
