UFO10726.5prime Sequence
792 bp (792 high quality bases) assembled on 2012-01-17
> UFO10726.5prime
CAGTCGACATGTCGGCTGATACTTTCGTAATGGACACCAAGGATGAATCG
TTCTACGAGTGTAACATATGTCTAGACACCGCCCAGAATGCCGTGGTCAG
CATGTGTGGCCATTTGTTTTGCTGGCCATGTCTGTACCAATGGATATTGA
CGAAACCCGATCACACAGTGTGTCCCGTTTGCAAGTCGGGCGTGGATAGG
AGCAAAGTAATACCGGTGTACGCACGAAATGATAAAAGGCAGGAGGATCC
GCGGGATAAAACACCGCCGCGTCCAACTGGAATTTGGTCGGATTACGCAA
ATGATCTCGAGTTGGGACTATTTTCGTACTTGCTTTTTGGTTTATTCTTT
CCATATGGTGCCCTATCATCTTATCTGGATATGGACGAGCCACTCAATCC
TGCTGCTGATCACGGCATAAGGGATGGGCAGAACGAAACACTCCTTTCTA
AGTTCTTTCTCTACGTGGCCATTATGCTCATTATTTATATGATTGTAATT
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
UFO10726.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:48:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32847-RB | 730 | CG32847-RB | 51..542 | 9..500 | 2460 | 100 | Plus |
| CG8974-RE | 1317 | CG8974-RE | 468..646 | 52..230 | 310 | 78.9 | Plus |
| CG8974-RD | 1280 | CG8974-RD | 431..609 | 52..230 | 310 | 78.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:48:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15121622..15122113 | 9..500 | 2460 | 100 | Plus |
| X | 23542271 | X | 15794520..15794698 | 230..52 | 310 | 78.2 | Minus |
| X | 23542271 | X | 15797690..15797868 | 230..52 | 310 | 78.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:48:35 has no hits.
UFO10726.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:57:52 Download gff for
UFO10726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32847-RB | 51..549 | 9..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:13 Download gff for
UFO10726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32847-RB | 51..549 | 9..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:54 Download gff for
UFO10726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32847-RB | 51..549 | 9..505 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:54 Download gff for
UFO10726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15121622..15122120 | 9..505 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:13 Download gff for
UFO10726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15114722..15115220 | 9..505 | 99 | | Plus |
