UFO10728.5prime Sequence
986 bp (984 high quality bases) assembled on 2012-01-17
> UFO10728.5prime
CAGTCGACATGGAATCGAGGGACCGGAAAACTTCGAATGAGGACGACTCG
TCGGAAATCTCCGAATTGGATGTGGGCAGTGATAGGTTTAATCCTCTGCG
AGCGTTATACGAACCCAATTTTAGGGTGACCGATGCTGTTCCAAAGGTCA
TCTACCAGAATCTGGCTGCCTTCGAGAGTGCACTTAAAAAATTCGGCATC
TGGCAGCTGAACAAGCGCCAAAAGCCGGGATCCGCAGAAGGAGGAGATCA
GGGGACATCGAAAAAGGCTTCCACTTCCGAGGCTGTAGATATTCTACCTC
CTGAGCGACGTTTTGAGCCGCACCAGATGCCTACCACTAGTAGCAGAAAG
AAGCATCATCGAAATATTTTCACCTACATGGAGGCAGCTGTCGGTCCATT
GGAACTCCTAACGAAGTGCATATCCCCTGCTAGCCACAATGAATCCAACG
AAAGGAGAAGAGTTCGGGTGGTGATTCGCAAACACGGATCGGTGGGCGGC
AGTGTCGAGGGTGAACTGTTGGCCTTTGACAAGCAGTGGAACCTCCTACT
GAGGAATGTTACCGAAACCTGGAAGCGACGAAAGTACAATTACGGAGAGC
AAAACATATGCGACACACCTGTTGATTGCACAGGCCGCCTCAAGGAGTTG
GGTATCACTCTTCCCAGGACTGTAGTCAAAAATCTAAACCGAAAAAACGT
GGAGATTCGGCGAGAGCTCCCACAGATTTTAATACGCGGCGAGAATGTGG
TTCTAGTTAGTTTAATACCAACAAAAGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGGTCATAATCATAATCATAAATCATATC
ATAATCACACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCAAGAT
GGAAGTTCTGAGGTCAATTACTGGGATCCTATCAAC
UFO10728.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:48:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lsm11-RA | 1067 | CG12924-RA | 87..855 | 8..776 | 3830 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9838646..9839414 | 776..8 | 3830 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:48:43 has no hits.
UFO10728.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:57:53 Download gff for
UFO10728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lsm11-RA | 81..855 | 1..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:17 Download gff for
UFO10728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lsm11-RA | 81..855 | 1..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:57 Download gff for
UFO10728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lsm11-RA | 81..855 | 1..776 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:57 Download gff for
UFO10728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9838646..9839420 | 1..776 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:17 Download gff for
UFO10728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5726151..5726925 | 1..776 | 99 | | Minus |
