UFO10733.5prime Sequence
1131 bp (1023 high quality bases) assembled on 2012-01-17
> UFO10733.5prime
CAGTCGACATGGCTAGCAACTACGAGGGCTACAAGTCGCCGCTGAGCACC
CGGTACGCCAGCAAAGAGATGCAGTTCCTCTTCAGTGACCAGAACAAGTT
CTCCACCTGGCGCCGGTTGTGGGTGTGGCTGGCGAAGGCGGAGAGCAGGC
TGGGACTAGAGATCAGCGATGCCCAGATTGCCGAGATGGAGCTCCAGATC
AGCAACATCGACTTTGAGGCGGCCGCCGCCGAGGAGCGACTTACGCGCCA
CGACGTAATGGCCCACGTCCATGTCTTTGCCAAACAGTGTCCCTCTGCTG
CGCCGGTGATCCATTTGGGAGCAACCTCGTGCTATGTGGGCGACAACACT
GATCTGATTGTACTGAGGGACGCTCTTAAACTGCTCCTTCCACGAGTCGC
CAGCGTGATAGCTCGTCTAAGCCAGTTTGCCCAGAGCTACAAGGATCAGC
CCACGTTGGGATTCACCCATCTCCAGCCTGCGCAGTTGACCACGGTTGGC
AAGCGGGCGTGCCTGTGGATCCAGGATCTGATCATGGACGAACGCGCGCT
GTCCCGCTGTTTAGAGGACCTGCGCTTCCGTGGAGTCAAGGGAACTACTG
GTACCCAGGCCTCGTTCCTGCAACTTTTCAATGGGGATGGCGAGAAGGTG
AAGCAGCTGGATCAGTTGGTCACCGAACTGGCTGGCTTCAAGAAGGCCTA
TGCGGTAACCGGTCAAACATACTCCCGAAAGGTGGATGTGGAGATCGTGG
CCGCGCTTGCCAGTCTCGGCACCACCATCCACAAGATGTGCTCCGATCTG
CGCATCCTCGCTTCTCGCAAAGAGCTGGAGGAGCCCTTCGAGAGCACTCA
GATTGGCTCCTCGGCCATGCCGTACAGAGGAACCCTATGCGCTCGGAGCG
TTGTGCGCCCTGCCCGTCACTCATCACTTGTTCAGCAGTGCTGCTAATAC
ACATGCCACTCAGTGGCTGGAACGCACTCTGGATGACTCTGCACAGAGTG
ACCCTTTCCGAGGCTCTGCTGCAATGCCGCCTGCTACTCTGCTGACATCT
CGCAGACTGTCGTTTACCAAGGTGATTGACGCACATTCCAAGACTGCCGT
TCATGTCCAGAAACTTTCATGTCATGGTGTA
UFO10733.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdSL-RA | 2341 | CG3590-RA | 127..1255 | 9..1109 | 4990 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17020006..17020994 | 992..9 | 4695 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:49:19 has no hits.
UFO10733.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:57:57 Download gff for
UFO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3590-RA | 95..1083 | 9..992 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:36 Download gff for
UFO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3590-RA | 127..1115 | 9..992 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:14 Download gff for
UFO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AdSL-RA | 127..1115 | 9..992 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:14 Download gff for
UFO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17020006..17020994 | 9..992 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:36 Download gff for
UFO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12845728..12846716 | 9..992 | 99 | | Minus |
