UFO10740.5prime Sequence
1152 bp (1010 high quality bases) assembled on 2012-01-17
> UFO10740.5prime
CAGTCGACATGCTGCAGCGCAGTTACGACCTTTCGCCCTCGCCGGCGCGT
ACTTCACCCACCAATGGAGTCCAGAACTTGGGAGCTGGGGCACAGTTGCC
ACCGGCTCAAGTCACTGACTTTAGCATCAGTAAGATTCTGGGCAAGGAGC
GTAAATCCGCTCAGGATACGAGCACGAATATCCTGGATCTATCCAAGAGC
AGTAGCAACAGTATTAGGAGCCCACAGGCTCTTGGAGGGCTGGCAATACC
ATCAACTCCTTATGCCTCCGGTGCCTACTCCATGTTGCCGCCAGATTTGG
TGGCCATGGCCAATGCCACCAAGTTCTATGCCCAATTCTTCCCGCACTTA
CTGCCCGCCTATGCGGCTGCTGCAGCGGCTGCCGGCTTGAGTACTCCTCC
TACGTCGCCCTATCAAACACATCAGCATCAGCAGCATTTGCCAAATCAGC
AGAAACGCTTCTTTGCTCCCTATGTGATCAATGGATCGGTTCCCCCACCA
CCACCACTGCAGCAGCAACAGCAACCTCTCATACGCACCAAAAGCACCGC
ATGCACTCGTCCGGATTGCCCGGAGTGCCTGGATTATTACCAAAGATTGC
AGACTGGTGGCTATAAGCAGACCGCACCTCTCATCTCACCCGCCGCCTCC
TCGGTGAGCAGTTCCACCGGATCAATACGTCCTGTGAGGGATCTGATTAT
GAGTGCCACTGGAGGAGCCGCCAGCACTAACATCTCACTGACCACCGTGA
CCAATCTGAGTCTGAACTCGGTCCAGGCAACGGCCGTCGGAATGATGCCC
AAGATGACCGGTGGACTGATCACCACAGCCGTCGGCAGCAACAGTGGAGC
AATCGGTGGTATCGGTGGATACATGCCACATCCGCCGAGGAGATCAGCTA
CAGTGCCGGATTTGCGAGAAGTATTCGGATGCTCTGAAACTCTGCAGCTC
ATGAAAAGACGCACAAATCGCGCGTTACGGTGTGCGGATGTAGAAAGGTT
TCCTCCAGCTGCCAAATTACAATATCACCTGTCGTCCACCGAGACAGAGT
TGCGGCGATGTTCCGAATGGGCAGAATTCACGATAGGATATTTGACAGAT
TCACCTCAAAGATCCGACCGAAGGAATCGAGTTCTTACGTCCATCCGTCA
AT
UFO10740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15269-RA | 2122 | CG15269-RA | 180..1225 | 8..1043 | 4905 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:50:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15109584..15110526 | 8..947 | 4565 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-27 20:50:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6794 | 495..548 | 112 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6764..6815 | 495..548 | 112 | 70.4 | Plus |
UFO10740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:01 Download gff for
UFO10740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15269-RA | 1..1045 | 9..1043 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:06 Download gff for
UFO10740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15269-RA | 175..1225 | 1..1043 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:39 Download gff for
UFO10740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15269-RA | 175..1225 | 1..1043 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:39 Download gff for
UFO10740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15109579..15110526 | 1..946 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:06 Download gff for
UFO10740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15109579..15110526 | 1..946 | 99 | -> | Plus |
