UFO10744.5prime Sequence
1164 bp (1060 high quality bases) assembled on 2012-01-17
> UFO10744.5prime
CAGTCGACATGATTGGCACTAGCAGCGGAACGTCCCACAATCGGAGTCGA
AAGAAGAAAGAACAGTGCGGATCCTGTCCCAACAGATTCTCAAAGGATAA
GCGCCAGGTGGCCGCCGAGGACTCGGATACCACGGAGGTGGAATCGTCTA
CGGATGAGGAGGAACGCTGGAAGGAAGTGGCGCGAGCCGCTGAGATTCCG
GCTGACTATTATAATATCCAAAAACTGGTGAAATACATCAAGGCGGGCAA
TCAGACAGCCACTATAGTATCGTTGTGCTGCTTGAAGGACTACGATCTGA
GCACCCAGATCAATCAGTTCGCCATCTCGGACATCGGCGGACTCGATGTC
TTGGTTAACATCCTGGAGTGCAGCGACACCAAGTGCTGTTTGGGCGCCCT
CAAAGTTCTCTCAGATATCACACTGAACATCGATATTAGGAAGACCATCG
TAGATCTGGATGGCATTCCCCTCATTGTGGACATCCTAAACTCTTCCATG
AAGGACCTAAAAACCATGGCCGCCGAGACATTGGCCAATGTGTGCAAGGT
GCGACTGGCCAGAAAGTATGTGCGCACCTGCGGAGGAATCCCCAAGCTGG
TGGATCTCATCGACATCAAGTTGAGCATTCTAAAGACGCCTCGTGACCAA
TTGAGTCCAGATGATCTGGAATCTCTCGATATGACACGCGCTGGAGCCCG
GGCTCTTTTCACTCTGGCCGATTCCAAGCACAACATGGAGCAGATGCGCA
AGAGCGGAATTGTTCCTTTGATGGCTCAGCTCCTTAAGTCCTGTCACATC
GATGTCGTCATTCCCATAATGGGCACCGTTCGAAAGTGCTCCTCGGAGCC
GAAGTTCCAACTGGCCATCACCACCGAGGGCATGATTCCCGACATTGTGA
GCCATCTGAGTTCCGAAAATACCGAGCTGAAGATGGAGGGCAGTACAGCG
ATCTACAGTGCGCCTTCGACGGAACCACCAGGGATTTGGTGAGGAGCTGG
GGGCTTGAACCTTTGTTACTATCATAAAGACAAGAATGTGAGGAAAATAA
GCCTTATTGAAGGCGCCACTGGAGCGATTTGGATGTGTGCGTACGAATGC
AATGTCCAAATGCTGAATCAACTCAGACGTACACTGGTGCTGCGCTAAAT
GATGTGAGGTGTAA
UFO10744.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gudu-RA | 2252 | CG5155-RA | 169..1298 | 9..1126 | 5260 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:50:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7388676..7389292 | 9..625 | 3085 | 100 | Plus |
| 2L | 23513712 | 2L | 7389373..7389848 | 624..1090 | 1935 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:50:43 has no hits.
UFO10744.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:04 Download gff for
UFO10744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5155-RA | 137..1244 | 2..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:21 Download gff for
UFO10744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5155-RA | 166..1273 | 2..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:52 Download gff for
UFO10744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gudu-RA | 166..1273 | 2..1102 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:52 Download gff for
UFO10744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7388673..7389292 | 2..625 | 99 | -> | Plus |
| 2L | 7389375..7389862 | 626..1102 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:21 Download gff for
UFO10744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7388673..7389292 | 2..625 | 99 | -> | Plus |
| arm_2L | 7389375..7389862 | 626..1102 | 97 | | Plus |
