UFO10747.5prime Sequence
1093 bp (1018 high quality bases) assembled on 2012-01-17
> UFO10747.5prime
CAGTCGACATGCGTGGACTGCAGACAAATCGCCACTCAAGCTTCCACCAC
CTGCTCCTCCTTTTCCTGGTCCTCCTGAGATCAGACCGTTGTTTTGGCAT
TGTTTGCTACCACTGCGATTCCATTGCCCTGCCGGAATGTTCCCAGACCC
TCGGAGAAGTGGGAGTTCTTCCCTACAAGGAGTGCGCTACCGAGCTGACG
TGTGCCATGTCCATTGTGGACTCCATTACATACCGCGGCTGCGGAGCAGA
AACCCCCATCATCGGAGCGACTTACTCAAAGACTTGCTCAACGAACCTGT
GCAATGCGGGTGTCTATCCGCCGGGACGACTTAAGTGCCATCATTGCGCT
GGACAGGAATGCGTGGCAGCTCCAGCATCCAAACCAAAACCCTGTCGCTA
TCATTTGGAAGAGGATCAGTGCTACACGGATGTCATAAGTTCTTCAGATG
CCTACAGAGGTTGTACCTCCGAGCAGAATCACACGCTGTCCACTTCCGCC
CAACTGTGTGAGATCAATGGCTGCAATGAGGAGCAAGGAGCTTGGACCCA
AGTCTGCGCCACCTGCGATTCAGCAATCGGCCGGGGTTGCAAGATAGATC
TCTTTCAGGTCAACACCGGCAGGTGCAATGTTAGCTTATACGAGGAATGC
CAGCAGGATGTTCTGTTGGGTGAGCAAGAGGATAAGTACTGCTTCAGCTT
TCGCAGACTAAGCCGCGTTGTCAGAGGATGTTCTACTAAAATTCCAACAG
ATTTGGAGCCGTATGTAGAGCAATTAGAAAAGTGTAATACCAGTGACCAC
TGCAACGCAGGATGCATTACGCAGCAGAAGTGTTTTACATGCAACTCCGT
GGATCAGGAACTTTGCCGGACAAATATTACGGCTATAGCTAATAGCCACT
TGTAGCTCCGCTGAGGCCTCTTCCTGTTTCTCCTGTGAGTACTCCACTGG
AGTATTCAGCGAGGCTGTGGAGCACGCCGAATCCTCAATCACCAGTGCTA
TGAATGCGATGAGCGCTGGGTTAATAGTAAGATTCACTCGGTGCTACCAA
TGCAGCACGAATCAGCGGGGAGCAGGCTGGTGCAATTGGGGAA
UFO10747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15170-RA | 1718 | CG15170-RA | 7..1101 | 9..1093 | 5060 | 98.2 | Plus |
| CG15170-RB | 1715 | CG15170-RB | 7..1098 | 9..1093 | 5005 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18988898..18989772 | 1079..216 | 3780 | 97.8 | Minus |
| 2L | 23513712 | 2L | 18989953..18990087 | 216..82 | 675 | 100 | Minus |
| 2L | 23513712 | 2L | 18990155..18990227 | 81..9 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:49:33 has no hits.
UFO10747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:57:58 Download gff for
UFO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15170-RA | 1..1101 | 3..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:46 Download gff for
UFO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15170-RA | 1..1101 | 3..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:20 Download gff for
UFO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15170-RA | 1..1101 | 3..1093 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:20 Download gff for
UFO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18988884..18989771 | 217..1093 | 97 | <- | Minus |
| 2L | 18989953..18990087 | 82..216 | 100 | <- | Minus |
| 2L | 18990155..18990235 | 1..81 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:46 Download gff for
UFO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18988884..18989771 | 217..1093 | 97 | <- | Minus |
| arm_2L | 18989953..18990087 | 82..216 | 100 | <- | Minus |
| arm_2L | 18990155..18990235 | 1..81 | 96 | | Minus |
