UFO10749.5prime Sequence
1096 bp (990 high quality bases) assembled on 2012-01-17
> UFO10749.5prime
CAGTCGACATGCTGGGCCTGCGACGAGTTCTGCGATTGGGTGCACTGCGT
CAGCTTCGCTCGTTAAGTGGCAAGCCGCAAGGCGATGTCCTTCCCGGGAG
CTGCGGAGTCCTGATAATAGGTGGCGGTGGCATGGGCGCCTCCTCCGCTT
TCTGGCTGAAGTCCCGGGCCCTGCAGCTGGGCCGCAAGCTCAATGTGCTG
GTGGTGGAGCGCGATGCTGGTTACACCAGCGCATCTACAGTGCTTTCTGT
AGGCGGAGTGCGGCAGCAGTTCTCTTTGGCCGAGAACATAGAGATGTCGC
TCTTCGGATACAACTTCGTGGTTAACGGCAGGGAGCATCTGGGCGACGTG
GATCTGTGCTACCAGCCGAACGGCTACCTGATCCTTGCCTCCGAGAAGGG
AGCCCACATCCTAGCAAAGAACTCAAAGCTACAGAACGAGCTGGGGGCCC
GAAATGAGCTGCTAGGCCCGGAGGCACTGCGTCAGCGGTTTCCGTGGTTG
TCCACAGAGGGCGTGGAGCTGGGATGCCACGGGATTGACAAGGAGGGATG
GTTTGATCCGTGGGCCCTGCTCATGGGCTACAAGAAGAAGGCCCGTGCAT
TGGGGGCGAATTTCGCGAACGGTTCGGTAGTGGGTTTTGAGTGGAACGAT
TCGGGCGGCCTTTCTGGAGCTGTGGTCGACGCCGGAGATGTGTTGCAGCG
CACGGTGAAGTTTGACACGTGCGTTCTGGCAGCGGGAGCGTACTCGGGTC
ACGTGGCGCGTCTGGGCAGGATTGGTGATAAAGGAAGCAAAAGGAGCTTC
CCTGAGTGTAGCCCCTGCCGGTGGAGCCCTCGGCAAGCGATACGTCTAAT
GTGGTTAGCACTCAGGTTAAGAATTGTCCTGGGCTAGCCACACCTCTTGA
CCGTTTGATCCCGATGGCACCTTACTTCAGGCGGAACGCTCTTTGCGCAA
CTTCCTGTGGCGCCGCATTCAAACGAAGAACGAGGAGCCGGATGGCGAAC
GCTGTTCGTGTACCACGGTACTTTGAACCGGATGTCCTGGCTCTCACTTG
CCAACCAGTTTTCCTGCTTTGAGATTCTGTGAAAATAGCAGCAACT
UFO10749.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3270-RA | 1449 | CG3270-RA | 11..1081 | 9..1087 | 4595 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:51:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6693962..6694771 | 222..1036 | 3170 | 95.4 | Plus |
| 2R | 25286936 | 2R | 6693440..6693652 | 9..221 | 1065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:51:14 has no hits.
UFO10749.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:07 Download gff for
UFO10749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3270-RA | 1..1042 | 9..1056 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:37 Download gff for
UFO10749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3270-RA | 11..1052 | 9..1056 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:05 Download gff for
UFO10749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3270-RA | 11..1052 | 9..1056 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:05 Download gff for
UFO10749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6693440..6693652 | 9..221 | 100 | -> | Plus |
| 2R | 6693962..6694790 | 222..1056 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:37 Download gff for
UFO10749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2580945..2581157 | 9..221 | 100 | -> | Plus |
| arm_2R | 2581467..2582295 | 222..1056 | 95 | | Plus |
