UFO10750.5prime Sequence
1139 bp (1019 high quality bases) assembled on 2012-01-17
> UFO10750.5prime
CAGTCGACATGAGAGTGTTTTTGGTGGTGTTGAGTGTGCTGTCTGTGGCG
GTGGCCACCAAGTGTCCGTATTCGGCAATGGAACCCTCCTTGTCCAGGTC
CAAACGGAGTTCTTTTGATATTCGCCCAGGAGTTAGTGACGGAAGTTTGG
ATGCCTTGATTAAAGAATTTATGCCCAAGTACAATGGCAACAATGTTCAC
AATAGTTGGGCCGAGCCTTCTGCCTCCCAACAACCTTTAAGATGTGGAGT
TCCGCCTCGCAACTGCTTGAATGATACTCGAAATCTGCACTACCGAACCT
TGGATGGATCATGCAACAATCTGTTGTATCCGGAGTTTGGAATTGCCGTT
TCGCGCTATCGTAGGCTTTTGCCTCCTCGCCAAGTGGAACAGGCTCCGAA
TGCCCGTTTGATCTCCTTGTCGCTGTACGGCGAGCAGACGAGGAACGATA
GGTTCCGCACCATGGCGGCCATGCAATGGGGCCAGTTTGTTGCCCACGAT
ATCAGCCAATTGAGCACACAGGGCGCTCCTCAAGATTGCTGTGCCGAGCC
GCGTCATCCTCGCTGTCTGCCAATCAACCTGCCCCGTGGTGGTCCCATCG
CATACCATACGGGCAAGACCTGTCTGCACTTTGCACGCAGTGTGTCGGAT
GCGGATGCCATATGCCCAAAGGTTGAGGAACCCCAACCGGAGAAGCTAAC
GGTGGCAACTGCTTACCTGGATCTCTCCTCCATCTATGGCAACAATCCCT
CGCAAAACAGAAAGGTCCGCTTGTTCAAGGGCGGACTTCTGAAGACCAGC
TACACGAACGGACAACACTGGCTACCGGTGAGCCAAAATGAGAATGGCGA
GTGCGGTGCCAAGAGTGAGTGCTACATCGTACCGGACATTCGGAATCGTT
TCTCGCCCACCATCGCCCTATTGCAGACTCTGTTGGTCCGAGAGCACAAT
CGTCTGGCGAAAATCTAGCGCTGATAATCCCGATCATAGTGACGAGCGCA
TCTCAAGGAGCACGCAAGATACATGCGCAGTCAAGAAGAATCAAATACTA
TGACTGGCTCCACTTGTCGTGGTCGCACCTATACCTACTTGACCGACTGA
ATTATTCATGGAGCCCACCGCGATAGCACGACATCACAC
UFO10750.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:51:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4009-RC | 2214 | CG4009-RC | 28..1150 | 9..1120 | 5185 | 98.1 | Plus |
| CG4009-RB | 2086 | CG4009-RB | 28..1150 | 9..1120 | 5185 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17034896..17036018 | 1120..9 | 4900 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:51:23 has no hits.
UFO10750.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:07 Download gff for
UFO10750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4009-RB | 21..1154 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:41 Download gff for
UFO10750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4009-RB | 21..1154 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:07 Download gff for
UFO10750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4009-RB | 21..1154 | 1..1125 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:07 Download gff for
UFO10750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17034892..17036025 | 1..1125 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:41 Download gff for
UFO10750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12860614..12861747 | 1..1125 | 97 | | Minus |
