UFO10761.5prime Sequence
1124 bp (979 high quality bases) assembled on 2012-01-17
> UFO10761.5prime
CAGTCGACATGGATCATGATGGGGATACGAGGGACTTTATGCGGGGATAT
CACAGCGAGCAGGATGAGAAAATGAAGCCGAAAGACTCGTTCGATAAGCG
TGAAGATCTGGCTACGGCGATCCTGAAGCGCAAGGACCGTCCCAACCGAC
TGATTGTGGAAGAGGCGCAGAATGACGACAACTCTGTGGTGTCGCTATCG
CAGGCGAAGATGGATGAGCTGCAGCTCTTCCGTGGCGACACCGTGATTCT
GAAGGGCAAGCGCCGAAAGGAGACGGTGTGCATCGTGCTCTCGGACGACA
CCTGTCCCGACGAGAAGATCCGCATGAACCGCGTGGTGCGCAACAACCTG
TGCGTCCATCTTTCAGATGTGGTTTCCGTGCAGTCCTGCCCGGACGTCAA
GTACGGCAAACGGGTGCGCATCCTGCCCATCGACGAAAGCACCGAAGGCG
TTACCGGCAACCTGTTCGAGATCTATCTGAAGCCGTACTTCCTAGAGGCC
TATCGGCCAATCCACATGGGCGACAACTTTATTGTGCGCGCCGCCATGCG
TCCTATTGAGTTCAAGGTGGTGCTGACCGACCCGGAGCCCTACTGCATCG
TAGCTCCCGAGACTGTAATCTTCTGCGACGGTGATCCAATCAAGCGCGAG
GAGGAGGAGGAGTCCCTAAACGCCGTTGGCTACGATGATATCGGTGGTTG
CCGCAAGCAGCTGGCCCAGATCAAGGAGATGGTTGAGTTGCCTTTGCGGC
ATCCATCGCTCTTCAAGGCCATTGGTGTGAAGCCACCGCGTGGGTATTCT
TATGTACGGTCCCCCGGGTACCGGGTAAGACCCTGATTGCCAGGGCTGGT
GGCCAACGAGACCGGAGCCTTTTTTTCTTCCTGATTAACGGACCGGGAGA
TCATGTTCCAAACTGGGCCGGGAAAGTCGGATTCGAATCTGCGTAAGGCC
TTCGAGGAAGCGAAAAAAACTTCGCCGGCTATCATCTTCATCGATGAAAT
CGACGCTTATTGCCCCAGCGGTGAACAAGAACCCACCGGTGGAGGTGACG
GTTCGCATTTGGGTCTCAACTTTTGACCCTGAATGATGGCATGAAAAAAA
AGCCTCCAATCTGATCGGTTATGG
UFO10761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:52:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TER94-RE | 3055 | CG2331-RE | 96..1194 | 9..1124 | 4755 | 96.2 | Plus |
| TER94-RC | 3058 | CG2331-RC | 96..1194 | 9..1124 | 4755 | 96.2 | Plus |
| TER94-RA | 3016 | CG2331-RA | 141..1152 | 96..1124 | 4305 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:52:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9990657..9991454 | 201..1007 | 3475 | 97.4 | Plus |
| 2R | 25286936 | 2R | 9990470..9990574 | 100..204 | 525 | 100 | Plus |
| 2R | 25286936 | 2R | 9990298..9990389 | 9..100 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:52:10 has no hits.
UFO10761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:11 Download gff for
UFO10761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TER94-RC | 1..990 | 9..1007 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:07 Download gff for
UFO10761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TER94-RC | 96..1085 | 9..1007 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:25 Download gff for
UFO10761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TER94-RC | 96..1085 | 9..1007 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:25 Download gff for
UFO10761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9990298..9990389 | 9..100 | 100 | -> | Plus |
| 2R | 9990471..9990573 | 101..203 | 100 | -> | Plus |
| 2R | 9990660..9991454 | 204..1007 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:07 Download gff for
UFO10761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5878165..5878959 | 204..1007 | 97 | == | Plus |
| arm_2R | 5877803..5877894 | 9..100 | 100 | -> | Plus |
| arm_2R | 5877976..5878078 | 101..203 | 100 | -> | Plus |
