UFO10768.5prime Sequence
1142 bp (1018 high quality bases) assembled on 2012-01-17
> UFO10768.5prime
CAGTCGACATGTTAAAGCCATCCAGGCGACCATTAGCCAACAGACAACGA
TCACTTCGATTCCGTCCACAGAATCGCAAAGGAACATCATCTAGTAACAC
CTCAATGGGACTGGACTTCGAGCTGGATGAGAAGAACGAAGATCAGGCAG
ATGAAAATGAAAAGAGTAGCTATGTCAGCCTCTCCAGGCCGAGCTCCAAA
GTACTAGATACGAGAAGTGCCAGTAGCTTGGACTTCGGGGACCACTGTAG
TCCCAGTATAACAAAATTACCCAAGAACAGCAGGGAAGGTAAGGAGGTCA
GCCTAATCATGAGTGATGAAGAGCCGGAAGATTACAGAAAGGGTCTGGGC
TCGAAGAGGAGGTTGCCAGACTCGGAAGCCCTTGGCAGCAAGCTAAAGGA
GGAACTCTGCAAGTACAAGCAGGAGCTCAAGGACTACAACGAAAGCACCA
AGGATCTGGAGGAGAAGTACATGAAAATTAACTACGAGCTGTGCGAAATG
CAGCAGAAGCACGATCAGTTCGTGTCCAGCAGGAAGCAGGCCCAGCAAAT
GGATCTGGGAAGTGAGCCCGATCCGGATGGATTTTATAGCTCTGCCAGCA
GTGTCACCTCGCAGACGACCATCAGACGAAAGAGCCCCCAAATCCTGCGC
AGCAATACCAGTTTCATGACCGTTCTATCGGGCCAGAGTTCCTGCGACGA
AATCGATAGAAAGAAATACGCGTCCGAAAGGAGTACTCATCAGCAGAATC
ACCATCGGCACAAGGACGATCTGCCATCACAGGTGAACAGCGTTTTTGAC
AGCCGTATTGTGGAAACACTGGCGAACCGTCACGTGAAGCGCAGGAAGAG
ATCCTTGGAGCAGACGATCGGGAAAGGGAGCCAGCATCCTTCAAGGATGT
GTACATGTGCTGAAGGATGTGATCAACACCTCACAGGATCAGAAGTACAA
GCATGACGGGATCGAGGTAGGGAAAGAGACAGGGACAGGACTCTGGAGAA
TATAAGCCAGCTCCTTACCTCCATTAGGACTGAGAGCGAGCAGGTCCAGT
TTCGACTCTCATCGGCAGCAGCAGGAAGAAATATCGACTACCACACGCGG
GTGTGTGAAGCCCAGGACTCATGATCCCTGAAGCAGAATCGA
UFO10768.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:52:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8851-RC | 2390 | CG8851-RC | 273..1398 | 9..1124 | 5210 | 98.3 | Plus |
| CG8851-RA | 2275 | CG8851-RA | 158..1283 | 9..1124 | 5210 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:52:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3520379..3521309 | 9..937 | 4540 | 99.7 | Plus |
| 2L | 23513712 | 2L | 3521365..3521538 | 934..1100 | 385 | 92 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:52:54 has no hits.
UFO10768.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:15 Download gff for
UFO10768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8851-RA | 113..1257 | 1..1136 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:33 Download gff for
UFO10768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8851-RA | 153..1297 | 1..1136 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:45 Download gff for
UFO10768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8851-RA | 153..1297 | 1..1136 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:45 Download gff for
UFO10768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3520374..3521308 | 1..936 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:33 Download gff for
UFO10768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3520374..3521308 | 1..936 | 99 | -> | Plus |
