UFO10772.5prime Sequence
1036 bp (1034 high quality bases) assembled on 2012-01-17
> UFO10772.5prime
CAGTCGACATGTTACGTGCCGTGGCTTTGTGTGTGTCTGTGGTGCTCATA
GCACTATATACGCCAACTTCTGGGGAATCCAGTCAGAGCTATCCCATCAC
CACGCTAATCAACGCGAAATGGACGCAGACGCCCCTATATCTGGAAATCG
CCGAGTATCTGGCCGATGAGCAGGCGGGCCTCTTCTGGGATTACGTTTCG
GGGGTGACCAAGTTGGACACGGTTCTCAACGAATATGATACCGAGTCGCA
ACAGTACAATGCCGCCTTGGAGCTGGTCAAGAGCCATGTGAGTTCTCCCC
AATTGCCCCTGCTTAGGCTGGTGGTATCCATGCATAGCTTGACGCCCCGG
ATCCAGACCCACTTCCAGTTGGCCGAGGAACTGAGGAGCAGTGGCTCTTG
TCAGAGCTTTACTTTTGCCCAGGTGGGTTCCGAACTGGCCTGCAGCTTTA
ACGAGCTGCAGAAGAAGCTGGAAGTGCCGCTCGCCAAGGATAGCTTGGAT
GCTTCTGTTGTCACCTACAGCTTTGATCACATTTTCCCTGGCAGTGAGAA
CAATACCCGCACTGTGGTACTATACGGCGATTTGGGAAGCTCTCAATTCC
GCACCTATCACAAACTATTGGAAAAGGAAGCCAATGCTGGCCGGATTCGT
TACATCTTGCGTCATCAATTGGCCAAGAAGGACAAGCGACCGGTACGACT
TTCGGGCTATGGAGTGGGAACTCCATCTGAAGTCAACGGAATACAAGAGT
CAGGATGATGCTCCAAAGCCCGAAGCTGGTTCCACTTCTGATGAGGATTT
GGCTAATGAATCGGACGTCCAGGGCTTTGATTTCAAGGTGCTGAAGCAGA
AGCATCCTACACTTAAGAGAGCGCTGGATCAACTGCGTCAGAGGCTTCTT
CAGGAAACGATGAGATCGCCCAATTGAAAGCATGGGAGTTCCAGGATTTG
GGTCTCCAGGCGGCGCTGCTATGCAGAAAATACAGGTGATGAACCCTACA
ATTCTTCAATATACTGCCATAATTCCCCATGTTGGC
UFO10772.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:52:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt-RA | 5316 | CG6850-RA | 203..1237 | 8..1036 | 4935 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18873361..18874146 | 237..1018 | 3560 | 98.6 | Plus |
| 3L | 28110227 | 3L | 18872949..18873178 | 8..237 | 1150 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:52:03 has no hits.
UFO10772.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:11 Download gff for
UFO10772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt-RA | 203..1237 | 8..1036 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:02 Download gff for
UFO10772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt-RA | 203..1237 | 8..1036 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:20 Download gff for
UFO10772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt-RA | 203..1237 | 8..1036 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:20 Download gff for
UFO10772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18872949..18873178 | 8..237 | 100 | -> | Plus |
| 3L | 18873362..18874166 | 238..1036 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:02 Download gff for
UFO10772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18866049..18866278 | 8..237 | 100 | -> | Plus |
| arm_3L | 18866462..18867266 | 238..1036 | 98 | | Plus |
