UFO10773.5prime Sequence
1132 bp (1004 high quality bases) assembled on 2012-01-17
> UFO10773.5prime
CAGTCGACATGGCATTCTCGCAGTCGTTCAACTTCGGAAACAGCACCTTA
ATGGCGCTGGAGAAAGGAATGCAAGCGGACGACAAGGAGAATGCACAGCC
AGGAAACGGAAATATCCAAGTCCAAAGTGCCGGCAATGAGGTAAATAGCG
AGATCCAGGAAATTAACTCGGAGTTTTTCCGGGACGAGTTCTCCTACGAA
GTGAATCAGGCCCATAAGCCAGCTGAACAATCAGTGGTCAATGTGTCTCA
GGTTCAGCAGCATATGGCAGTTGTTTCCAATCAGGACTCTGAGGATCAGA
GCCGCTCATCCGCTTTGAATGACCAAATCTGCACACAGTCTTCGTTCGAG
GGCGAGGACGCAGGCGCGGATGCAGTGCTGGATCAGCCCAATCTGGATGA
GAACAGCTTTTTGTGTCCTGCGCAGGATGAAGAGGCTTCCGAGCAGCTGA
AGGAAGACATCTTGCACAGTCATTCCGTATTGGCCAAGCAGGAATTCTAT
CAAGAGATTTCGCAAGTCACGCAGAACCTGAGCAGCATGTCGCCCAACCA
ACTGCGAGTGTCGCCCAACTCCTCGAGGATCCGCGAAGCGATGCCCGAAA
GACCAGCAATGCCACTTGATCTCAACACGCTTAGATCAATAAGCGCATGG
AACCTGCCCATGAGCATTCAAGCGGAGTACAAGAAGAAGGGTGTTGTCGA
TATGTTCGACTGGCAGGTGGAGTGTCTCTCCAAGCCTAGATTGCTGTTTG
AGCACTGCAACCTGGTTTATTCAGCACCCACGTCGGCAGGCAAGACGTTG
GTTAGTGAGATACTGATGCTGAAAACCGTACTGGAGCGAGGTAAAAAGGT
GCTGCTCATACTGCCCTTCATCTCGGTGGTGCGCGAGAAAATGTTCTACA
TGCAGGATCTGCTCACGCCGGCTGGTTACCGCGTGAGGGATTCTACGGCG
GCTTATACGCCACCAGGAGGCTTTGAGAGCCTTCATGTGCCATTTGCACA
ATTGAGAGGCGACTCAATTGTGACAGCTGATGGAGCAGCAAACTTGAACA
TTGGCCATGGTTGGTGGTAGACGATGCATCTCATTTCCGGAACAGTACCG
CTTATATCTGAACTTCGCTAGCAGGATCCCTC
UFO10773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:53:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mus308-RA | 6420 | CG6019-RA | 93..1180 | 9..1087 | 5080 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12711208..12712207 | 1007..9 | 4855 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:53:01 has no hits.
UFO10773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:16 Download gff for
UFO10773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus308-RA | 85..1185 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:37 Download gff for
UFO10773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus308-RA | 85..1185 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:49 Download gff for
UFO10773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus308-RA | 85..1185 | 1..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:49 Download gff for
UFO10773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12711115..12712211 | 1..1094 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:37 Download gff for
UFO10773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8536837..8537933 | 1..1094 | 97 | | Minus |
