UFO10775.5prime Sequence
1112 bp (1011 high quality bases) assembled on 2012-01-17
> UFO10775.5prime
CAGTCGACATGGACGACCTGTCGCAGGGCGACATTTGCCGCGTGTGCAGA
TGCGAGGCACAGCCGGATAGGCCTCTTTTCTACCCGTGCATCTGCACTGG
ATCGATCAAGTACATTCATCAGGACTGCCTGATGTTATGGATGCGCTACT
CGCACAAGGAATACTGCGAGCTGTGCAGCTACAGCTTCAGCTTTCAGCCC
ATCTATGCTCCGGATATGCCGCGAGTCCTGCCGATAAAGGATGTCCTTGT
GGGACTGATGTCCGCCGTTTTGGAGGGCGCTCGCTGCTGGCTTCATTACA
CCCTGGTCGGTTTGGCCTGGTTCGGAGTGGTGCCGCTGTCTGCCTACAGG
ACCTATCGGTACCTCTTCCGGGCGAGCTCCTTCGATATGATTCTCACGCT
GCCCTTTGACATCTTCTCCGTTGAAAACCTGGCATCGGATGCCTTTCGGG
GCTGTTTTGTGGTCACATGCACACTTTTGTCCTTCATAGGATTGGTCTGG
CTGCGCGAGCAGATCCTGCATGGCGGCGGACCCGATTGGCTGGAGCGGGA
CGATGCCCCTCTACAGGCAGCGGCTGCTAATCCTGCGCCTGATCCCGCCG
CCGAGGCAGCTCCACAGCCTCAGGACGACAACAACAATGCCGACGACAAT
GAAGCGCCGGCTCCAGCGGACAACGATGGGCAGGATGCCCAGGCCCAGGA
TGCCGCACCAGCGGCTGCAGCTCTCGTCGTGGACGCCGATGCCGATGAGC
AGAATTGGAATCCCATGGAGTGGGATCGGGCTGCCGAGGAGCTTACCTGG
GAACGCCTGCTCGGACTCGATGGCTCGCTAGTTTTTCTGGAGCACGTCTT
CTGGATCATCTCACTGAACACCATGTTCATCTTCACCTTCGCCTTTTGTC
CCTACTGCGTGGGCAACTTCATTCTGAGCTCCATGGATCTTTGCAGCCCG
AGAAACACTGCTACCTTTCACGCCTGATACCACGCTATTGGTACTGCTGC
ATGATTGACCTGTGTGCTGCACTCTCTCAGAAGTTCGCTTGCCGAAGTTG
CTGTCATGAATGTCTATTGTGGTCAGGTCCTGCTGTCCGGGTGAAATCGA
AATCCCTAATTG
UFO10775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:53:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1317-RD | 3836 | CG1317-RD | 278..1304 | 9..1023 | 4830 | 98.7 | Plus |
| CG1317-RC | 3665 | CG1317-RC | 278..1304 | 9..1023 | 4830 | 98.7 | Plus |
| CG1317-RB | 3869 | CG1317-RB | 278..1304 | 9..1023 | 4830 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2370714..2371662 | 956..9 | 4680 | 99.8 | Minus |
Blast to na_te.dros performed 2014-11-27 20:53:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 3971..4005 | 1054..1020 | 112 | 80 | Minus |
UFO10775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:17 Download gff for
UFO10775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1317-RC | 295..1309 | 1..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:40 Download gff for
UFO10775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1317-RB | 274..1288 | 1..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:51 Download gff for
UFO10775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1317-RB | 274..1288 | 1..1010 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:51 Download gff for
UFO10775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2370652..2371666 | 1..1010 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:40 Download gff for
UFO10775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2370652..2371666 | 1..1010 | 98 | | Minus |
