UFO10781.5prime Sequence
1165 bp (1026 high quality bases) assembled on 2012-01-17
> UFO10781.5prime
CAGTCGACATGCCGCCCACGGAGACACTGCGTCCGGGAGAACGCGGAACA
GCCGGTGGACCGGGAGCAGGAGCACCCGAACAAACGTACATCGTCAGGCA
GAGCAACAAATACTATGAACACCGAGATTCCCAGGCCACGGCCATGTCGG
TTGATTACTCGGGTCAGTGGGTGCTCCTCGCGGGCCGTGGTCACCTGGCT
TTGCAGCGTTTGGGACAGGACGATGGGTCTCTGCGACGACATGAACGGCA
ATCGAAGTACGAGGTGTCCGTAGCAGAGTTTGCCATATGTCCCAGTCGCA
AAGAGTACTGCGCCATAGCGACTAGCCAGCACATAGACATCGTTCGCTGG
GGCACTGCGGAACCACACTACGAGATGTCCTTGCGTGGGCATACTCGAAC
AGTGACCGACATTGACTGGCACGGCAAGGATCCGAATCTGCTGGTCAGCT
GCTCAATAGACACATTTTCTCATATTTGGGACTTAAGGGAGCCCAGGAAA
CCAGCCCTGTCCTTGAATGCCGTGTGCATGTCTGGTGCTACACAAGTGGG
ATTCAACCGCGTTTCGGGCAACCTTTTGGCTGCTGCCCATGATGGAGATT
TACGCATCTGGGATATTCGCAAGGGTAGTTGCCCGACGCACTATATCACA
GCACATTTAAATAGAGTGCATGGCATCAATTGGAGCCACAAAAGGGAGAC
CTGCTTGGCAACCGCCAGTCATGATGGAACGGTCAAGTACTTTGATGTAT
GTAATCCTCGCAGGGCCGAGAAGATCATTACAACCATGTCGCCCGTTTGG
AGAGCGAGATACACGCCTATTGGCAACGGTCTGGTTAGCATTGTGGTGCC
CCATTTGGGACGCGGAGGAGAATAGTTTGCTGCTCTGGAGCAACAGCAAG
CAAACGGACCCTATTTGTTCCTTCGTGGGGCACACCGATGTCATTCTTGA
CTTTGCCTGGCGTCCAAATCGTGAAAGTTCATGAAATAGACTGGTCACTT
GGTCCAAGGGATCGCACGCTGCGGGTGTTGAAGATCGATGATAATATGCT
AAGCTTGGCGACGTCTGGCGAGAAATAGAATCCGTTCGAGCCCGATCTTC
AGTGGTTAGAGTGCCTACTCCTCGAATTCCTGCACATCCAGATTCAATTT
GTGGGTGTGCCGCGC
UFO10781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4705-RD | 3292 | CG4705-RD | 124..1259 | 9..1134 | 5250 | 98.2 | Plus |
| CG4705-RB | 3197 | CG4705-RB | 124..1259 | 9..1134 | 5250 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11091567..11091878 | 9..320 | 1560 | 100 | Plus |
| 2L | 23513712 | 2L | 11092209..11092492 | 532..815 | 1405 | 99.6 | Plus |
| 2L | 23513712 | 2L | 11091941..11092152 | 320..531 | 1060 | 100 | Plus |
| 2L | 23513712 | 2L | 11092552..11092716 | 815..980 | 780 | 99.4 | Plus |
| 2L | 23513712 | 2L | 11092784..11092845 | 990..1052 | 250 | 96.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:54:00 has no hits.
UFO10781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:21 Download gff for
UFO10781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4705-RB | 126..1269 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:05 Download gff for
UFO10781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4705-RB | 124..1267 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:10 Download gff for
UFO10781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4705-RB | 124..1267 | 9..1143 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:10 Download gff for
UFO10781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11091567..11091878 | 9..320 | 100 | -> | Plus |
| 2L | 11091942..11092152 | 321..531 | 100 | -> | Plus |
| 2L | 11092209..11092492 | 532..815 | 99 | -> | Plus |
| 2L | 11092553..11092726 | 816..988 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:05 Download gff for
UFO10781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11091567..11091878 | 9..320 | 100 | -> | Plus |
| arm_2L | 11091942..11092152 | 321..531 | 100 | -> | Plus |
| arm_2L | 11092209..11092492 | 532..815 | 99 | -> | Plus |
| arm_2L | 11092553..11092726 | 816..988 | 98 | -> | Plus |
