UFO10783.5prime Sequence
1072 bp (1046 high quality bases) assembled on 2012-01-17
> UFO10783.5prime
CAGTCGACATGTCTCACCTGACCGGCACCCGCGTGAGCACCTTCAACGAG
AGCTTCCTTAACGAAAATGAGCACGACTCGAATGCGGTGCTCATGGAACT
GGACAAGGGACTGCGGAGCACCAAGCAGGGAATCCAGTGCGAGGCGGTCG
TCCGCTTTCCGCGCCTCTTCGAGAAGTATCCGTTTCCCATTCTCATCAAC
TCGTCGTTCATTAAGCTGGCCGATTACTTTGTCAGCGGATCGAATCTGCT
GCGCTTCTGGGTGCTCCGTGTTTGCCAGCAGAGCGAGAATCATCTGGACA
AGATCCTCAACATTGACAGCTTTGTGCGCTGTATCTTTGTGGTGATGCAC
TCCAACGATCCGGTGGCGCGTGCTCTCCTCCTGCGCACCTTGGGCGCCGT
TTCCCGTGTGATTCCCGAGAAGCAACAGGTTCATCATGCCATTCGACGTG
CTCTGGATAGCCACGATACCGTCGAGGTGGAGGCTGCCATCTATGCCAGC
AGCTGCTTTGCCGCCCAGTCAAGTTCCTTTGCCATCAGCATGTGCGCCAA
GATTTCGGACATGATCGAATCGCTTCAGGTGCCGGTGCCAATGAAGCTGC
TCCTGATTCCCGTGTTGCGACACATGCATCACGAGGCTACCACAGCGTCA
CTGGTTAGCAGACTGTGCATGGATCTGCTGCCCAAATATCCAGCCCAGAG
CTTTGTGGTGGCCATCATAGACACGCTCACTCAATTGTCATCACGAACGC
TGGTGGGAGTGCCCGGTCAGCTGGATGTTCTGCTGGATTTCATGCAGGAC
TTAAGGACACCAGTACGCATACAGGTGCTGCGATCTTTCAACGAGTTGGC
CGGACGTCAGAGCGTTCATGCCTGGCCCAAGCCAGCCATCAAAGCGCTCA
TTGATCGTTTTGAATTGTGTACCAATTCCAAGGAGCAGTTCTCTCCTCTC
AATCCTGCTGAAGTAGCGAGTGCCGCTTACTTGCCAGCAGCTGCTTCGCG
AGCATCGCGTAGCCCTGCTCGTTTGGGCATCCAGTGCATTAGCAAGCTGG
ACGACTACCCCACCCGCCACTC
UFO10783.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:54:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| defl-RA | 3227 | CG18176-RA | 119..1188 | 8..1072 | 5160 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9723541..9724603 | 8..1064 | 5025 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:54:08 has no hits.
UFO10783.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:22 Download gff for
UFO10783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| defl-RA | 108..1184 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:08 Download gff for
UFO10783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| defl-RA | 112..1188 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:13 Download gff for
UFO10783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| defl-RA | 112..1188 | 1..1072 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:13 Download gff for
UFO10783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9723534..9724610 | 1..1072 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:08 Download gff for
UFO10783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9716634..9717710 | 1..1072 | 98 | | Plus |
