UFO10793.5prime Sequence
1109 bp (1002 high quality bases) assembled on 2012-01-17
> UFO10793.5prime
CAGTCGACATGTCTTGGACCGCTTCAGTTTTCTTGAGGACTTCCACCACT
AGCATGAAGTTTCTGCGTCTGCGCTGGCCTCTCCCCAGAATTCCCCAGAA
TAAATCGGCAAACGTTGCGCCGCGTTTCAGAAGCAAATCAGCAGTCAGCC
AGCTCTCATCTGGATTTAAATTTGTGCAGATCCGCAAAAGTACTTGTGAC
AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACGACTC
CCGTGGCAACCCCACCGTGGAGGTCGACCTGACCACCGAGCTGGGACTCT
TCCGCGCCGCCGTGCCCTCCGGCGCCTCCACTGGCGTCCACGAGGCCCTG
GAGCTGCGCGACAACGACAAGGCCAACTACCATGGCAAGTCGGTGCTGAA
GGCCGTGGGCCATGTGAACGACACCCTGGGCCCCGAGCTGATCAAGGCCA
ATCTGGATGTGGTTGACCAGGCGTCCATTGACAACTTCATGATCAAGTTG
GACGGCACCGAGAACAAGAGCAAGTTCGGAGCCAACGCCATCCTGGGCGT
TTCCCTGGCCGTGGCCAAGGCTGGAGCCGCCAAGAAGGGCGTGCCGCTGT
ACAAACACATTGCCGATCTGGCTGGCAACAAGGAGATCATCCTGCCGGTG
CCCGCTTTCAACGTGATCAACGGCGGCAGCCACGCCGGCAACAAGCTGGC
CATGCAGGAGTTCATGATCCTGCCCACCGGCGCCACCAGCTTCACAGAGG
CCATGAAGATGGGCTCCGAGGTGTACCACCACCTGAAGAATGTGATCAAG
GCCAAGTTCGGTCTGGACGCCACCGCCGTGGGCGATGAGGGCGGCTTCGC
CCCCAACATCCAGTCCAACAAGGAGGCTCTGAATCTGATCAGCGATGCCA
TCGCCAAGCCGGATACACCGGCAAGATCGAGATCGGCATGATGTGGCCGC
CTCCGAGTTCTACAGATGGCCAGTACGATCTGGACTTCAGGACGAGAGAG
CGAACAGTTCGCAGTGCTGCCCGCCGACAGCTGCCACTTGTACAAGGAGT
TTATCAAGAACTTCCCCATCGTCTCGATGAAGATCCCTTTGACAGAACCA
CTGGGAATC
UFO10793.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eno-RD | 2198 | CG17654-RD | 328..1437 | 8..1106 | 5015 | 97.5 | Plus |
| Eno-RC | 2257 | CG17654-RC | 387..1496 | 8..1106 | 5015 | 97.5 | Plus |
| Eno-RE | 2664 | CG17654-RE | 588..1697 | 8..1106 | 5015 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1725735..1726656 | 1106..196 | 3800 | 96.4 | Minus |
| 2L | 23513712 | 2L | 1727646..1727834 | 196..8 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:55:22 has no hits.
UFO10793.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:28 Download gff for
UFO10793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eno-RC | 374..1495 | 1..1109 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:47 Download gff for
UFO10793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eno-RE | 579..1700 | 1..1109 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:43 Download gff for
UFO10793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eno-RE | 579..1700 | 1..1109 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:43 Download gff for
UFO10793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1727646..1727837 | 1..196 | 97 | | Minus |
| 2L | 1725732..1726655 | 197..1109 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:47 Download gff for
UFO10793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1725732..1726655 | 197..1109 | 96 | <- | Minus |
| arm_2L | 1727646..1727837 | 1..196 | 97 | | Minus |
