UFO10795.5prime Sequence
1065 bp (1003 high quality bases) assembled on 2012-01-17
> UFO10795.5prime
CAGTCGACATGAGCAGTCCCAGGGATAAGGCGGAGCAGGTGTACGAGGTG
AAGGCTCCACATGCCGGTGCAGAGGGTCACACGTTCCTTGTGAGTCCCGT
GGACCCCACTCCGATCCTAGCGCCCATTCTCACCGCTGTGCCTGTGATGA
AAGCACCGGATTCGCCTGCTTCAATGGACAAGACCAAGGAGATGGAGGAG
CTGGATGATGAGCAGCCGAGCTGCAGTTCCCAGGCGGTGGTGCCGTTGTC
CTCATCGCTGCCCTGCAAGCTGCTCCGCATGCATGCCAGACGCTCGGCCC
AGGCGCTGCTCCACCAAATGGAATCGATGGACTCTCAGCTGGGCAGCAGC
AATGGCAGCACCTCGGAGGATACTTCACCCTCTGCTCCGCCCATGTCGCC
CACTGACCACCAACTGGTGGATGTGGGCATGGGTTCCTCCATTGGGGACT
CGGATGAATCGTCGGAAGAGGGTGATGAGCTGAAGCCCCTGGCCGTGGAC
AATCACATCATAGCCGAGGTGGACCTAACCGAGCGCCAGACTACGCCACC
GGCCGTCTTGAGTGAGGCGAATTTGGAGAAGTTCCGTAAGCACCAGATGG
ATAACATCTATCTACATCCTAACTTCACTCTGGATGCTTCTCCACCTCCG
GCGGTCGCACCAGCCAACTCACCCGTTCTGGAGGCCAAGAGAACCCATCG
TTCGTTCCTCACCATGAAGAAGGAAAAGGAGGTGGAGCCGCCGCAAGAGA
AGGAGCAGAAGTGCCGGTACACCAGGAACAGGATACTGAGCCCCAAGGAC
CCAATGAGATAGACACACTAGATCCTCTCACTCATTCCCAGCGAGGAACT
GGCAGCCGAAATCACCGATGCCGTGGAGTTCTACTTCTCCAATGAGAGCA
TCCTGAAAGATGCATTCCTGCTGAAACATGTGCGACGCAACAAAGGAGGG
TTTCGTCAGCCTTAAACTGTGTCAGCTTTCAGGAGGTGCGCCAACTGACC
AGGGAGTGAAAGGTGGTTTGAGAATGCAGTGGCGTCCCAAAGTCCCGCAG
AATCCGAGCTTGAAA
UFO10795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:55:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17386-RB | 4441 | CG17386-RB | 715..1754 | 8..1049 | 4905 | 98.6 | Plus |
| CG17386-RA | 4271 | CG17386-RA | 715..1754 | 8..1049 | 4905 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14421038..14422054 | 8..1023 | 4740 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:55:33 has no hits.
UFO10795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 09:58:29 Download gff for
UFO10795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 698..1742 | 8..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:54 Download gff for
UFO10795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 715..1759 | 8..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:47 Download gff for
UFO10795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 715..1759 | 8..1054 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:47 Download gff for
UFO10795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14421038..14422082 | 8..1054 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:54 Download gff for
UFO10795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10308543..10309587 | 8..1054 | 98 | | Plus |
