UFO10805.5prime Sequence
772 bp (700 high quality bases) assembled on 2012-01-19
> UFO10805.5prime
CAGTCGACATGGCTGAAATCAGGCTAGTTGTGGTTCTACTGGTCCTTATG
ACCACCTGTATCTATACACTTCAAGCCAGTGACAGTAATTCCTCCGTGGC
AACCACCTTGGGCGTTTTGTTCGAGAGGGCTCCCGAATCAGCGGTGGCCC
CGAAAGGAGATGAGGTGGTCTTCGAGTGCGAGCTGAATCTGAAACCTGAT
CGCCTGGAGTGGCGGTTTAGACGTGGTGATTCCTCGGAGCCCTATCTATA
CCTAAGGCCCTCGGCTGGCTATAACGTGACCAGCGGAAGCGATGGTCTTG
CCTGGAGACTGCGCATCTATGTGAGTGCCCAAACGGCTGGGGACTACCAG
TGTGTGGCTTGGTATGGCCCGGGTGCACTGGCTTCCACGCCAGCCCGCTT
GGCCTTGGTCTCGATTGCTTTGGACGTCGGCCAGGGATCCATGGGGGCCA
GGAGCTCCATCCGCTGGAGCGTGGCGCCCAAAAACTGCCTGCTCATTCGT
TGCGGCAGCGTAATATCGAATCCGCCGGCTATTTGGAGCTTCTACAGAAA
CGGAAAGAAGCTACCTCAATCGGAGCTGCTGCCTGGCGCTGCGGGGGCAT
TGGTTTTGGATACGGTCACCGTCAAAGATGCGGGTAACTACTCGTGCGTG
GCCACGAACTCCATAACAGGCGATGAACTTAGGCTCCCCCCAACTATTGC
AAGTCCAGCCACAGCACTCGTGGTCCTACGTACCCCGATGGCCTCACATC
ATAAGGATAACAGCAACTTGCT
UFO10805.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boi-RG | 4544 | CG32796-RG | 343..1033 | 9..699 | 3425 | 99.7 | Plus |
| boi-RF | 4509 | CG32796-RF | 629..1319 | 9..699 | 3425 | 99.7 | Plus |
| boi-RE | 4316 | CG32796-RE | 436..1126 | 9..699 | 3425 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2451439..2452129 | 699..9 | 3425 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:00:48 has no hits.
UFO10805.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:00 Download gff for
UFO10805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RE | 389..1093 | 1..708 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:08:29 Download gff for
UFO10805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RE | 429..1133 | 1..708 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:35:55 Download gff for
UFO10805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RE | 429..1133 | 1..708 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:35:55 Download gff for
UFO10805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2451432..2452133 | 1..708 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:08:29 Download gff for
UFO10805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2345465..2346166 | 1..708 | 98 | | Minus |
