UFO10820.5prime Sequence
1124 bp (1055 high quality bases) assembled on 2012-01-19
> UFO10820.5prime
CAGTCGACATGAGCGCAATAAAGCCCGCCCTGCTGCTCTGCCTGATCCTC
ACCATCGGTCTGTTCCTTGGTCAAGGTCGGGCGAATCCCGTGGAGACGAA
TGTTCCCGATATTCCCGCACCCGATGCCAACGAACTGGGCATCGATTTCG
GAGAGGAGGAAGATGCCACCGACAAGCCACTGGGCATATTCACGATCAAG
GTGCGCCACATTCAGCCGGACCCCGCCCACTGCGCCCAGCTCTCGCCACA
TCACCCACACCACCCCCAGTGCCACAGCTACTGCAAACGCCAAGGTCACT
GGGTGGGCCAGTGCAAGAAGGACATCTGTCAGTGCTTTTCCGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCAATAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGGAATAGGCCAGGTTTTC
ACCGTAACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATC
GTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCTGTTTGCTCATGGA
AAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCT
TTCATTGCCATACGAAATTCCGGATGACCATTCATCAGGCGGGCAGAATG
TTGAATAATGTCGAAAACCTTGTGCCTATTTTCTTTACGGTCTTTTAAAA
GGCGTAATTATCCAGCCGAACGGT
UFO10820.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:01:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34331-RB | 609 | CG34331-RB | 28..364 | 5..341 | 1670 | 99.7 | Plus |
| CG34331-RC | 599 | CG34331-RC | 28..223 | 5..200 | 965 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:01:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20122480..20122816 | 5..341 | 1670 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:01:42 has no hits.
UFO10820.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:10 Download gff for
UFO10820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34331-RB | 21..360 | 1..341 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:00 Download gff for
UFO10820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34331-RB | 25..364 | 1..341 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:36:20 Download gff for
UFO10820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34331-RB | 25..364 | 1..341 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:36:20 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 18:09:00 has no hits.
