UFO10834.5prime Sequence
1085 bp (1006 high quality bases) assembled on 2012-01-19
> UFO10834.5prime
CAGTCGACATGACTGAGGAAGTTAATCCCAAGGCATTCCCGCTGGCCGAT
GCCCAGCTTACCGCCAAGATCATGAACTTGCTGCAGCAAGCATTGAACTA
CAATCAACTGCGCAAGGGAGCCAACGAGGCCACCAAGACCCTCAATCGCG
GACTGGCCGATATTGTGGTGCTGGCCGGTGATGCGGAGCCCATCGAGATT
CTGCTCCATTTGCCGCTCCTGTGCGAGGACAAGAACGTGCCCTACGTCTT
CGTTCGTTCCAAGCAGGCCTTGGGGCGTGCGTGCGGAGTTTCCCGGCCAA
TAGTCGCCTGCTCTGTGACCACCAACGAGGGCAGCCAGCTCAAGTCGCAG
ATCACCTCCATTCAGCAGGAGATCGAGCGACTGCTAGTCGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCA
CCGTAACACGCCACATCTTGCGATATATTGTGTAGAAACTGCCGGAAATC
GTCGTGGTATTCACTCCAAAGCGATGAAAACGTTTCAGTTTCTCATGGAA
AACGGTGGAACACGGGGAACACTATCCATATCACAGCTCACGTCTTCATG
CATACGAATTCGATGACATCATCAGCGCAGATGGA
UFO10834.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:01:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoip-RB | 607 | CG3949-RB | 145..525 | 9..389 | 1905 | 100 | Plus |
| hoip-RA | 569 | CG3949-RA | 107..487 | 9..389 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:01:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9699999..9700377 | 11..389 | 1895 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:01:48 has no hits.
UFO10834.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:11 Download gff for
UFO10834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoip-RA | 136..525 | 1..389 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:03 Download gff for
UFO10834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoip-RA | 98..487 | 1..389 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:36:23 Download gff for
UFO10834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoip-RA | 98..487 | 1..389 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:36:23 Download gff for
UFO10834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9699992..9700377 | 1..389 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:03 Download gff for
UFO10834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9699992..9700377 | 1..389 | 98 | == | Plus |
