UFO10835.5prime Sequence
1024 bp (1000 high quality bases) assembled on 2012-01-19
> UFO10835.5prime
CAGTCGACATGACCAGCTCGAGGAATATGCTACTGATGCTGCTCCTGGTG
GCCAGTGCCTCCATACTTCAACTGGAGGCCAAGACCGTGTTCCGGCGCAC
AGACAAGATATCGGAGAACTTCAAGCAGTTAGATTTGCCGCCAGAGGAGA
TCGATCCCAATGTGGCGCCACCGGAATCGGAGCCGCCCAAGGTGGAGGAT
GTCGCTGATGTGGCGGATGAGGTGGTCAATGCCGTGTCGCCTGCTTCGTC
CATCGACGAGAGTGCCAATGAGATAGCCAGCGGTGATGTGGATACCCCGA
ATGCTGCAGCTTCCGTTGCAGAAGCTGTCGCCCCAGCCGCTGCCGTTCCC
GAGGTCGCAGAGGCAGCTGCTCCGGCGGTGGCCACCACTCTAGCGGCCAA
GCCTACCACTGCACCGACCACCGCCAAGCCGGAGAATCCCATCAGCAAGT
TCTGCAAGTGCTCGGAGAGCCACTGCGACTGCTGCCGGAAGTTCGGATTG
CCATTGCTGCCCAGCGGACCTGGCTGCGCCAAGATCGCCTATGTGGGCAA
CGACGAGATGAGCGTGTCCCTCAAATACGGTGGCATCACCTTGGCCTCTC
GTCGCATCTCCAGCAAGCGGGCTCGCCCCATTTGCGTGGGCCTGCCCGGC
GGCTACTCCAAGTTCTGCGGCAAGGTCTATGGTCTGTCCCGTTCCAAGGA
GTCCAAGGACTTCAAGGCATGCCTGGCCTTTGAACTGCGCTCCGACGACG
AGGTGGAGGCCTCCCTGCGCGTCTCCTGTTTCAAGTTTGGACCGGAAGGA
GTCCGGGTGGCCGAGGCGGAGCCGTTGCCTGTGAAGCCCAGTTCGGATGA
CGATGATGACGACGATGATGACCTCTTTGGGATTTGCCGCTGGTGGCGAC
GATGACGAGGATGAGGAGACGACTATGACAGCGACACGATACGATGCGAT
GCGATGACGACGATGACACGAGACTATGCCGATGATGACGAGCCGAGCGC
CGAGATGCTGATACGGTGGCCTTA
UFO10835.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15239-RA | 1997 | CG15239-RA | 322..1348 | 9..1024 | 4800 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:01:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3888663..3889534 | 9..880 | 4360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:01:50 has no hits.
UFO10835.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:12 Download gff for
UFO10835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15239-RA | 309..1342 | 1..1023 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:05 Download gff for
UFO10835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15239-RA | 309..1342 | 1..1023 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:36:25 Download gff for
UFO10835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15239-RA | 313..1346 | 1..1023 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:36:25 Download gff for
UFO10835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3888654..3889542 | 1..889 | 99 | -> | Plus |
| X | 3889691..3889835 | 890..1023 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:05 Download gff for
UFO10835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3782687..3783575 | 1..889 | 99 | -> | Plus |
| arm_X | 3783724..3783868 | 890..1023 | 91 | | Plus |
