UFO10847.5prime Sequence
1034 bp (1019 high quality bases) assembled on 2012-01-19
> UFO10847.5prime
CAGTCGACATGGTGTACCAGGTGAAAGATAAGGCCGATCTCGATGGACAG
CTGACCAAGGCATCCGGCAAGCTGGTGGTGCTGGATTTCTTCGCCACTTG
GTGCGGACCCTGCAAGATGATCTCGCCCAAACTGGTTGAGCTTTCCACGC
AGTTCGCCGACAACGTCGTCGTCCTGAAGGTCGATGTGGACGAATGCGAA
GACATTGCAATGGAATACAACATCTCCAGCATGCCCACCTTCGTGTTCCT
CAAGAACGGCGTCAAGGTCGAAGAGTTCGCCGGAGCCAACGCCAAGCGTC
TGGAGGATGTCATCAAGGCCAATATCGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGC
CCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAA
TCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATT
CTCAATAAACCCTTTAGGGAATAGGCCAGGTTTTCACCGTAACACGCCAC
ATCTTGCGAAATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTC
CAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAACGGTGTACAGGTGAC
ACTTCCCATATCACCAGCTCACGTCTTTCATGCATACGAAATCCGGATGA
GCATCATCAGCGGCAAGAATTGTGAATAAGGCCG
UFO10847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:02:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trx-2-RA | 790 | CG31884-RA | 102..421 | 7..326 | 1600 | 100 | Plus |
| Trx-2-RB | 1338 | CG31884-RB | 293..612 | 7..326 | 1600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:02:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9615300..9615450 | 31..181 | 755 | 100 | Plus |
| 2L | 23513712 | 2L | 9615530..9615678 | 178..326 | 745 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:02:12 has no hits.
UFO10847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:17 Download gff for
UFO10847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trx-2-RB | 288..617 | 1..331 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:21 Download gff for
UFO10847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trx-2-RB | 287..616 | 1..331 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:36:39 Download gff for
UFO10847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trx-2-RB | 287..616 | 1..331 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:36:39 Download gff for
UFO10847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9615532..9615678 | 180..326 | 100 | == | Plus |
| 2L | 9615302..9615448 | 33..179 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:21 Download gff for
UFO10847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9615532..9615678 | 180..326 | 100 | == | Plus |
| arm_2L | 9615302..9615448 | 33..179 | 100 | -> | Plus |
