UFO10853.5prime Sequence
1147 bp (1037 high quality bases) assembled on 2012-01-19
> UFO10853.5prime
CAGTCGACATGCGCCGCTTGTTTACATCGGTCAACGCCCAAATAATGTCG
AAGAGCAAGGGGAAATCAAAGGCCGGCGTTGAAAGTGCGAAAAACGATGC
AAAAGCGATGCCGGCTAAGGAAGCCAGTCCGATTTCAGTCGATAAGAGCG
GCAATATATGCATACAAATCCTTGCCAAGCCGGGGGCTAAGCAGAACGGA
ATCACAGGAATTGGCTTTGAAGGAGTGGGCGTCCAAATCGCCGCTCCGCC
CAGCGAGGGAGAAGCTAACGCCGAACTGGTCAAGTTTCTGTCGAAAGTTC
TAGGTCTTCGAAAGAGCGACGTTTCTTTGGACAAGGGATCTCGATCGCGA
AACAAGATAATAATGATAACCAAGGGAGTGTCCACGGTGGAGGCCATTGA
GCAGCTGCTGCGCAAAGAATCCGATTCAGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATAT
TCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTACCCGCCA
CATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGGTATTCAC
TCCAGAGCGATGAAAACGTTTCAGTTGCTCATGGAAAACGTGTAACAAAG
GGTGAAACACTATCCATATCACAGCTCACCGGCCTCATGCCAGCGAAATC
GGATGACATCATCAGGCGGGCAAGAATGAATAGGGCGGATAAACTGT
UFO10853.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:02:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14966-RA | 587 | CG14966-RA | 112..531 | 9..428 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:02:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3197101..3197520 | 428..9 | 2100 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:02:56 has no hits.
UFO10853.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:25 Download gff for
UFO10853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14966-RA | 1..423 | 9..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:42 Download gff for
UFO10853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14966-RA | 106..537 | 1..436 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:36:57 Download gff for
UFO10853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14966-RA | 106..537 | 1..436 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:36:57 Download gff for
UFO10853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3197101..3197525 | 1..428 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:42 Download gff for
UFO10853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3197101..3197525 | 1..428 | 99 | | Minus |
