UFO10854.5prime Sequence
1152 bp (1027 high quality bases) assembled on 2012-01-19
> UFO10854.5prime
CAGTCGACATGTCGTTTGCGGAAAAGATAACGGGTCTGCTGGCACGGCCG
AATCAACAAGATCCAATTGGACCGGAGCAGCCGTGGTATCTCAAATATGG
AAGTCGATTGCTGGGCATTGTGGCCGCCTTCTTTGCCATTCTTTTCGGCC
TGTGGAATGTGTTCTCCATCATCACGCTCAGCGTATCCTGCCTGGTGGCT
GGCATCCTTCAAATGGTGGCAGGATTTGTGGTGATGCTCTTGGAGGCTCC
CTGCTGTTTCGTCTGCTTTGGGCAGGTGAACGAGATCGCGGAAAAGGTGG
AATCTAAGCCCTTGTACTTCCGTGCCGGGCTCTACATTGCCATGGCCATT
CCGCCCATTATTCTGTGCTTTGGACTGGCCAGCTTATTCGGCAGTGGGCT
GATCTTTGGCACTGGCGTGGTTTACGGCATGATGGCGTTAGGCAAGAACA
AGCATATATTTTTAGTGAGAAACTATATTGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCGACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCAATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAACTGGTGAACTCACCCAGGGATTGGCTGAGACGAAAAACATAT
TTCTCAATAAAGCTTTAGGGAAATAGGCCAGGTTTTCACCGTTACACGCC
ACATCTTGCGATTTATTGTGTAGAACTGCGGAAATCGTCGTGGTTTTTTG
TTCAGGAGCGGATGAAACGTTTCAGTTTGCTCATGGAACGTGTACAAGGG
TGAACATATCGTTTTCCACAGCTCACCGTCTTTCATTTGCATAACGAATT
TC
UFO10854.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:03:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fwe-RC | 2364 | CG6151-RC | 134..605 | 8..479 | 2360 | 100 | Plus |
| fwe-RA | 1342 | CG6151-RA | 134..574 | 8..448 | 2205 | 100 | Plus |
| fwe-RB | 3020 | CG6151-RB | 134..574 | 8..448 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:02:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15813419..15813626 | 340..133 | 1040 | 100 | Minus |
| 3L | 28110227 | 3L | 15815936..15816057 | 132..11 | 610 | 100 | Minus |
| 3L | 28110227 | 3L | 15813246..15813353 | 448..341 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:03:00 has no hits.
UFO10854.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:26 Download gff for
UFO10854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flower-RC | 132..618 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:44 Download gff for
UFO10854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RC | 127..613 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:36:58 Download gff for
UFO10854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RC | 127..613 | 1..486 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:36:58 Download gff for
UFO10854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15812211..15812241 | 449..479 | 100 | <- | Minus |
| 3L | 15813246..15813353 | 341..448 | 100 | <- | Minus |
| 3L | 15813419..15813626 | 133..340 | 100 | <- | Minus |
| 3L | 15815936..15816059 | 8..132 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:44 Download gff for
UFO10854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15805311..15805341 | 449..479 | 100 | <- | Minus |
| arm_3L | 15806346..15806453 | 341..448 | 100 | <- | Minus |
| arm_3L | 15806519..15806726 | 133..340 | 100 | <- | Minus |
| arm_3L | 15809036..15809159 | 8..132 | 99 | | Minus |
