UFO10855.5prime Sequence
1171 bp (956 high quality bases) assembled on 2012-01-19
> UFO10855.5prime
CAGTCGACATGGTCAGTGCCCGAGTCCTGAATCCTGTGATGATCAGTGAG
TTCTGCAAGATGAGCAGCAGCCCGGCGGTGAGTCGCAATCTGGCATGCGG
TCGTCAGTTGAATCGCATAAAGCGTGACCTCTTCGGTAGCTCCAAATCCG
CCGAGGGTACAGCCAACAAAACACCCTTTAATTCCGAACTGGAGCGCCAT
CAAGAACTGGCCACGCAAAAATGGGGCTTTGACTTCCGCGCCGGCTGCCC
TTTAGCTGAAAAATCACCCTACATTTGGGAGCGCGTCAGCTTCCAGGAGT
CGAGCTTCGCCCCAGAGATGTACACCCTAACACGGGCCGCCCACGTACGC
CCTTCCGCGGATGCAAGTCCTAGCGACATGGACATTTTGGTCAACGAGCG
CTCAGAACGGGAGAACTTTGGCTCCAATCTGGTCAATTCCTCGCTAGAGT
CGAACACGGATAATGAATCTTGTTACGACTCCCAGGACGAGTCGCTGGCA
ATGCGGCTTAGCTCCTCCAGCACGACAAGCACATCCTCCATAGTCCTGCG
CAAGAGACAGCCAAAAATCACAGAATTCATGAAGGAGCGCAAACGTCTGG
CCCAGGCACCCAAGAAACTATCGCCCGCTGAACGCATGCGCACCAGTTCT
CCCAGTTCGTCCGCCACTTCCAGCTCCAGCTCCAGCGGTGGATTTGGGTT
GGGGGCACACTTTGGGGCGATGTTGAAGCGGCCGCGCCACAACGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCATGTAAGTGGTCATAATCAT
AATCATAATCATAAATCATAATCACAACTAGGCTAGGAGATCCTGGTCAT
GACTAGTGCTTGATTCTCACAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCAGATGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
GAGTCCATGCGGGCCCGATATCAATTACCGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTATTCATTAAGCATTCTTGCCGACATTGAAAGCATTGAC
AAAACGGCATGAATGAACCTGAATCCGCCAGCGGCATCCCCCGCGTGGCC
GCCTTGCGAATATAAATTTGGCCCATGGGGTGAAACGGGGGGGCAAAAAA
TTGGTTCATTTTGTGCCCAGT
UFO10855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:03:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dap-RA | 2530 | CG1772-RA | 618..1354 | 7..743 | 3640 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:03:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9713163..9713563 | 173..573 | 2005 | 100 | Plus |
| 2R | 25286936 | 2R | 9712938..9713103 | 7..172 | 830 | 100 | Plus |
| 2R | 25286936 | 2R | 9714907..9715080 | 570..743 | 825 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:03:04 has no hits.
UFO10855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:26 Download gff for
UFO10855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dap-RA | 610..1359 | 1..750 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:47 Download gff for
UFO10855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dap-RA | 612..1361 | 1..750 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:37:00 Download gff for
UFO10855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dap-RA | 612..1361 | 1..750 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:37:00 Download gff for
UFO10855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9714911..9715087 | 574..750 | 96 | == | Plus |
| 2R | 9712932..9713103 | 1..172 | 98 | -> | Plus |
| 2R | 9713163..9713563 | 173..573 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:47 Download gff for
UFO10855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5602416..5602592 | 574..750 | 96 | == | Plus |
| arm_2R | 5600437..5600608 | 1..172 | 98 | -> | Plus |
| arm_2R | 5600668..5601068 | 173..573 | 100 | -> | Plus |
