UFO10863.5prime Sequence
1174 bp (1045 high quality bases) assembled on 2012-01-19
> UFO10863.5prime
CAGTCGACATGGATGCCTTGGACGGTACGACAATGGAACTGCACAACAGT
TTTCTACAGGTGGAGAGCACAACACACTTTCCTTTGGATTGCATCAGCGA
CATCGAGGTGGTGGATGGAAATGAATTAAAAGCCTCATTTTACGAATATG
CAGATGCTGTGCCAAAATATTTTAACGACCAAATAGGGAAATTGAGCGAA
GGGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAAACTGCGAGAGGTT
TTCCATCAATCTGGTTTATAACAATGACTCTCGAGATGTGGCGCTCCACA
TTAATCCACGGTTGCCACAAAACTATATTGTCCGCAACACCAAAGTACAG
GACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGCCGTTTCTACTAAG
TCGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACTGAGGCATGCTATA
TGATATCGGTAAACGGACAACACTTTGCAGCGTACACTCATCGAATCCCT
TATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATGTAAGTAACGTGGA
AATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGATTACCCCAGTCAG
AGGCTAATAACATTGAGCTTCACATAGATGATGGGATTAATGAAATTGAT
GCCAGCGTTGAGGAGACTGTTAAAATACCTCATGAGTGGTGCATTATTAG
CGCCCCGAACACACAGTCGGACAGTTCGCCTAAGCGTAACAATAGTTCGA
ATGATCTTGGCCTTACTTTGCCTTATTATGGAGCATTGCCACCAAACTCG
TTGGTCGATGGTCGATGCTTGAAGATTGAGGGAGAGTGCGATTACTTCCC
CACTCGTTTTATATAAACCTGCAACAGGGCAGGACATATGGCCACATCCA
GTAATTGCATTCCACTTAAACCCACGTTTTTCGAAAGCAAGCAGCGGCGC
TATTGGAAAGGCGGCTGGTGTTTAGAATGCCTGGCTTAATGAGCTTGGGC
CACAAGAAAGCGTTCGGAGTTTGAACCAAACTTTCGCCCTGTTCGGCCTA
ACGTTAGCAATTTTTTGTTACAAAAACATCTTTGAGGTGTATGTCGATCG
GCAGTTTATGAACTGATTTAAATATAAGGTATAGCCTTGAGCGTGGTGTG
CGAACCTCGTTCTCACGATCAAAG
UFO10863.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:03:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-RE | 1458 | CG11372-RE | 86..1228 | 9..1148 | 5160 | 97.5 | Plus |
| galectin-RA | 1841 | CG11372-RA | 469..1611 | 9..1148 | 4950 | 96.3 | Plus |
| galectin-RF | 1536 | CG11372-RF | 287..1306 | 132..1148 | 4545 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 75076..75965 | 246..1130 | 3690 | 95.8 | Plus |
| 2L | 23513712 | 2L | 73570..73693 | 9..132 | 620 | 100 | Plus |
| 2L | 23513712 | 2L | 74903..75020 | 132..249 | 590 | 100 | Plus |
| 2L | 23513712 | 2L | 72855..72978 | 9..132 | 410 | 88.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:03:21 has no hits.
UFO10863.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-19 16:17:29 Download gff for
UFO10863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RE | 86..1228 | 9..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:55 Download gff for
UFO10863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RE | 86..1228 | 9..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:37:09 Download gff for
UFO10863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RE | 86..1228 | 9..1148 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:37:09 Download gff for
UFO10863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 73570..73692 | 9..131 | 100 | -> | Plus |
| 2L | 74903..75018 | 132..247 | 100 | -> | Plus |
| 2L | 75078..75981 | 248..1148 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:55 Download gff for
UFO10863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 73570..73692 | 9..131 | 100 | -> | Plus |
| arm_2L | 74903..75018 | 132..247 | 100 | -> | Plus |
| arm_2L | 75078..75981 | 248..1148 | 96 | | Plus |
